Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim63Q38HM4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trim63Q38HM4 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trim63Q38HM4 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim63Q38HM4 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim63Q38HM4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim63Q38HM4 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Trim63Q38HM4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim63Q38HM4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trim63Q38HM4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.09□□□□□ -0.15
Trim63Q38HM4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim63Q38HM4 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim63Q38HM4 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim63Q38HM4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim63Q38HM4 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim63Q38HM4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim63Q38HM4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.09□□□□□ -0.15
Trim63Q38HM4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim63Q38HM4 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim63Q38HM4 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim63Q38HM4 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim63Q38HM4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim63Q38HM4 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.09□□□□□ -0.15
Trim63Q38HM4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trim63Q38HM4 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Trim63Q38HM4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim63Q38HM4 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Trim63Q38HM4 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim63Q38HM4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trim63Q38HM4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Trim63Q38HM4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim63Q38HM4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Trim63Q38HM4 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim63Q38HM4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim63Q38HM4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim63Q38HM4 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim63Q38HM4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim63Q38HM4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim63Q38HM4 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trim63Q38HM4 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim63Q38HM4 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
Trim63Q38HM4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim63Q38HM4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim63Q38HM4 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim63Q38HM4 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim63Q38HM4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim63Q38HM4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Trim63Q38HM4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim63Q38HM4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim63Q38HM4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim63Q38HM4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim63Q38HM4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim63Q38HM4 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Trim63Q38HM4 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim63Q38HM4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim63Q38HM4 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim63Q38HM4 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim63Q38HM4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim63Q38HM4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC14.07□□□□□ -0.16
Trim63Q38HM4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim63Q38HM4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim63Q38HM4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim63Q38HM4 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim63Q38HM4 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim63Q38HM4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim63Q38HM4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim63Q38HM4 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim63Q38HM4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim63Q38HM4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim63Q38HM4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim63Q38HM4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim63Q38HM4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim63Q38HM4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim63Q38HM4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim63Q38HM4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim63Q38HM4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trim63Q38HM4 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim63Q38HM4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim63Q38HM4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim63Q38HM4 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim63Q38HM4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim63Q38HM4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trim63Q38HM4 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.06□□□□□ -0.16
Trim63Q38HM4 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim63Q38HM4 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim63Q38HM4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim63Q38HM4 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trim63Q38HM4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim63Q38HM4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim63Q38HM4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim63Q38HM4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim63Q38HM4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC14.05□□□□□ -0.16
Trim63Q38HM4 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Trim63Q38HM4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim63Q38HM4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim63Q38HM4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim63Q38HM4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim63Q38HM4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim63Q38HM4 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim63Q38HM4 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms