Protein–RNA interactions for Protein: Q08943

Ssrp1, FACT complex subunit SSRP1, mousemouse

Known RBP Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1Q08943 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.85■□□□□ 0.61
Ssrp1Q08943 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.85■□□□□ 0.61
Ssrp1Q08943 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ssrp1Q08943 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ssrp1Q08943 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ssrp1Q08943 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ssrp1Q08943 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Ssrp1Q08943 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ssrp1Q08943 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ssrp1Q08943 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ssrp1Q08943 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ssrp1Q08943 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssrp1Q08943 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.84■□□□□ 0.61
Ssrp1Q08943 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssrp1Q08943 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssrp1Q08943 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssrp1Q08943 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssrp1Q08943 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ssrp1Q08943 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssrp1Q08943 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssrp1Q08943 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Ssrp1Q08943 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssrp1Q08943 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssrp1Q08943 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssrp1Q08943 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssrp1Q08943 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ssrp1Q08943 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssrp1Q08943 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssrp1Q08943 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssrp1Q08943 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssrp1Q08943 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ssrp1Q08943 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssrp1Q08943 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Ssrp1Q08943 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ssrp1Q08943 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ssrp1Q08943 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ssrp1Q08943 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ssrp1Q08943 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.83■□□□□ 0.61
Ssrp1Q08943 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssrp1Q08943 Gm7638-201ENSMUST00000121348 967 ntBASIC18.83■□□□□ 0.6
Ssrp1Q08943 Gm27011-201ENSMUST00000182352 972 ntBASIC18.83■□□□□ 0.6
Ssrp1Q08943 Gm9731-201ENSMUST00000209480 747 ntBASIC18.83■□□□□ 0.6
Ssrp1Q08943 Timm23-208ENSMUST00000226683 750 ntBASIC18.83■□□□□ 0.6
Ssrp1Q08943 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssrp1Q08943 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ssrp1Q08943 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ssrp1Q08943 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssrp1Q08943 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssrp1Q08943 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssrp1Q08943 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Ssrp1Q08943 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssrp1Q08943 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.82■□□□□ 0.6
Ssrp1Q08943 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssrp1Q08943 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssrp1Q08943 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssrp1Q08943 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssrp1Q08943 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ssrp1Q08943 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssrp1Q08943 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.82■□□□□ 0.6
Ssrp1Q08943 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssrp1Q08943 Gm10812-201ENSMUST00000099864 546 ntBASIC18.82■□□□□ 0.6
Ssrp1Q08943 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.82■□□□□ 0.6
Ssrp1Q08943 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssrp1Q08943 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ssrp1Q08943 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssrp1Q08943 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssrp1Q08943 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssrp1Q08943 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ssrp1Q08943 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssrp1Q08943 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.81■□□□□ 0.6
Ssrp1Q08943 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ssrp1Q08943 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssrp1Q08943 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssrp1Q08943 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssrp1Q08943 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssrp1Q08943 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ssrp1Q08943 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssrp1Q08943 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.81■□□□□ 0.6
Ssrp1Q08943 Gm715-201ENSMUST00000117865 831 ntBASIC18.81■□□□□ 0.6
Ssrp1Q08943 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.81■□□□□ 0.6
Ssrp1Q08943 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.81■□□□□ 0.6
Ssrp1Q08943 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.81■□□□□ 0.6
Ssrp1Q08943 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.81■□□□□ 0.6
Ssrp1Q08943 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.81■□□□□ 0.6
Ssrp1Q08943 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssrp1Q08943 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssrp1Q08943 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Ssrp1Q08943 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssrp1Q08943 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssrp1Q08943 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.81■□□□□ 0.6
Ssrp1Q08943 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssrp1Q08943 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ssrp1Q08943 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.81■□□□□ 0.6
Ssrp1Q08943 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ssrp1Q08943 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssrp1Q08943 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssrp1Q08943 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.8■□□□□ 0.6
Ssrp1Q08943 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ssrp1Q08943 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ssrp1Q08943 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms