Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hspg2Q05793 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hspg2Q05793 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hspg2Q05793 Gm11336-201ENSMUST00000118168 334 ntBASIC12.51□□□□□ -0.41
Hspg2Q05793 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hspg2Q05793 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hspg2Q05793 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hspg2Q05793 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hspg2Q05793 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hspg2Q05793 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hspg2Q05793 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hspg2Q05793 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hspg2Q05793 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hspg2Q05793 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.5□□□□□ -0.41
Hspg2Q05793 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Hspg2Q05793 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.5□□□□□ -0.41
Hspg2Q05793 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hspg2Q05793 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Hspg2Q05793 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hspg2Q05793 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hspg2Q05793 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC12.5□□□□□ -0.41
Hspg2Q05793 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.5□□□□□ -0.41
Hspg2Q05793 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Hspg2Q05793 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Hspg2Q05793 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hspg2Q05793 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hspg2Q05793 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hspg2Q05793 Gm14494-201ENSMUST00000118786 435 ntBASIC12.49□□□□□ -0.41
Hspg2Q05793 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Hspg2Q05793 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hspg2Q05793 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.49□□□□□ -0.41
Hspg2Q05793 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hspg2Q05793 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hspg2Q05793 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hspg2Q05793 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Hspg2Q05793 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hspg2Q05793 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.49□□□□□ -0.41
Hspg2Q05793 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hspg2Q05793 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hspg2Q05793 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hspg2Q05793 AC123834.2-201ENSMUST00000224038 2340 ntBASIC12.49□□□□□ -0.41
Hspg2Q05793 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hspg2Q05793 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.49□□□□□ -0.41
Hspg2Q05793 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hspg2Q05793 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.49□□□□□ -0.41
Hspg2Q05793 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.49□□□□□ -0.41
Hspg2Q05793 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.49□□□□□ -0.41
Hspg2Q05793 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hspg2Q05793 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hspg2Q05793 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.49□□□□□ -0.41
Hspg2Q05793 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hspg2Q05793 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hspg2Q05793 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hspg2Q05793 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.48□□□□□ -0.41
Hspg2Q05793 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.48□□□□□ -0.41
Hspg2Q05793 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hspg2Q05793 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hspg2Q05793 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hspg2Q05793 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hspg2Q05793 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hspg2Q05793 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hspg2Q05793 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hspg2Q05793 Gm9727-201ENSMUST00000161387 555 ntBASIC12.48□□□□□ -0.41
Hspg2Q05793 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hspg2Q05793 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hspg2Q05793 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hspg2Q05793 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.48□□□□□ -0.41
Hspg2Q05793 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hspg2Q05793 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.48□□□□□ -0.41
Hspg2Q05793 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hspg2Q05793 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.48□□□□□ -0.41
Hspg2Q05793 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hspg2Q05793 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.48□□□□□ -0.41
Hspg2Q05793 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hspg2Q05793 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hspg2Q05793 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hspg2Q05793 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hspg2Q05793 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.47□□□□□ -0.41
Hspg2Q05793 Gm45141-201ENSMUST00000206502 1888 ntBASIC12.47□□□□□ -0.41
Hspg2Q05793 Gm6296-201ENSMUST00000222599 943 ntBASIC12.47□□□□□ -0.41
Hspg2Q05793 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hspg2Q05793 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hspg2Q05793 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hspg2Q05793 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hspg2Q05793 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hspg2Q05793 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.47□□□□□ -0.41
Hspg2Q05793 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.47□□□□□ -0.41
Hspg2Q05793 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hspg2Q05793 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hspg2Q05793 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hspg2Q05793 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hspg2Q05793 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hspg2Q05793 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.47□□□□□ -0.41
Hspg2Q05793 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hspg2Q05793 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.47□□□□□ -0.41
Hspg2Q05793 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hspg2Q05793 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.47□□□□□ -0.41
Hspg2Q05793 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hspg2Q05793 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hspg2Q05793 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms