Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Col10a1Q05306 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Col10a1Q05306 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col10a1Q05306 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col10a1Q05306 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col10a1Q05306 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col10a1Q05306 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Col10a1Q05306 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col10a1Q05306 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col10a1Q05306 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col10a1Q05306 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.65■□□□□ 0.1
Col10a1Q05306 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Col10a1Q05306 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col10a1Q05306 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Col10a1Q05306 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Col10a1Q05306 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col10a1Q05306 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col10a1Q05306 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col10a1Q05306 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col10a1Q05306 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
Col10a1Q05306 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col10a1Q05306 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col10a1Q05306 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.64■□□□□ 0.09
Col10a1Q05306 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Col10a1Q05306 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col10a1Q05306 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col10a1Q05306 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col10a1Q05306 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Col10a1Q05306 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.63■□□□□ 0.09
Col10a1Q05306 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col10a1Q05306 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Col10a1Q05306 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.63■□□□□ 0.09
Col10a1Q05306 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.63■□□□□ 0.09
Col10a1Q05306 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.63■□□□□ 0.09
Col10a1Q05306 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col10a1Q05306 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Col10a1Q05306 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col10a1Q05306 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col10a1Q05306 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col10a1Q05306 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col10a1Q05306 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col10a1Q05306 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.63■□□□□ 0.09
Col10a1Q05306 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.63■□□□□ 0.09
Col10a1Q05306 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Col10a1Q05306 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col10a1Q05306 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col10a1Q05306 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col10a1Q05306 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col10a1Q05306 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col10a1Q05306 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col10a1Q05306 Gm18958-201ENSMUST00000174258 762 ntBASIC15.62■□□□□ 0.09
Col10a1Q05306 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col10a1Q05306 Gm2274-201ENSMUST00000184539 609 ntBASIC15.62■□□□□ 0.09
Col10a1Q05306 Gm7889-201ENSMUST00000185591 958 ntBASIC15.62■□□□□ 0.09
Col10a1Q05306 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col10a1Q05306 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col10a1Q05306 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col10a1Q05306 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col10a1Q05306 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col10a1Q05306 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col10a1Q05306 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col10a1Q05306 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col10a1Q05306 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col10a1Q05306 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col10a1Q05306 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col10a1Q05306 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col10a1Q05306 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Col10a1Q05306 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col10a1Q05306 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col10a1Q05306 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.62■□□□□ 0.09
Col10a1Q05306 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col10a1Q05306 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Col10a1Q05306 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col10a1Q05306 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col10a1Q05306 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col10a1Q05306 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col10a1Q05306 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col10a1Q05306 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Col10a1Q05306 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col10a1Q05306 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Col10a1Q05306 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.61■□□□□ 0.09
Col10a1Q05306 Mir7071-201ENSMUST00000184847 69 ntBASIC15.61■□□□□ 0.09
Col10a1Q05306 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col10a1Q05306 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col10a1Q05306 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col10a1Q05306 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col10a1Q05306 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col10a1Q05306 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col10a1Q05306 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Col10a1Q05306 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col10a1Q05306 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col10a1Q05306 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.61■□□□□ 0.09
Col10a1Q05306 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col10a1Q05306 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col10a1Q05306 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col10a1Q05306 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col10a1Q05306 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col10a1Q05306 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col10a1Q05306 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col10a1Q05306 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms