Protein–RNA interactions for Protein: P97742

Cpt1a, Carnitine O-palmitoyltransferase 1, liver isoform, mousemouse

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpt1aP97742 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpt1aP97742 Gm10013-201ENSMUST00000106074 672 ntBASIC16.54■□□□□ 0.24
Cpt1aP97742 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cpt1aP97742 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cpt1aP97742 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.54■□□□□ 0.24
Cpt1aP97742 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.54■□□□□ 0.24
Cpt1aP97742 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpt1aP97742 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.54■□□□□ 0.24
Cpt1aP97742 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpt1aP97742 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpt1aP97742 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpt1aP97742 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpt1aP97742 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpt1aP97742 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpt1aP97742 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpt1aP97742 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cpt1aP97742 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpt1aP97742 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cpt1aP97742 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpt1aP97742 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpt1aP97742 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cpt1aP97742 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cpt1aP97742 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpt1aP97742 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cpt1aP97742 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpt1aP97742 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpt1aP97742 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpt1aP97742 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cpt1aP97742 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpt1aP97742 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpt1aP97742 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpt1aP97742 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpt1aP97742 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Cpt1aP97742 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.53■□□□□ 0.24
Cpt1aP97742 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cpt1aP97742 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cpt1aP97742 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpt1aP97742 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpt1aP97742 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Cpt1aP97742 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpt1aP97742 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.52■□□□□ 0.24
Cpt1aP97742 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.52■□□□□ 0.24
Cpt1aP97742 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpt1aP97742 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Cpt1aP97742 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.52■□□□□ 0.24
Cpt1aP97742 Gm18101-201ENSMUST00000215769 548 ntBASIC16.52■□□□□ 0.24
Cpt1aP97742 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpt1aP97742 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.52■□□□□ 0.24
Cpt1aP97742 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cpt1aP97742 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.52■□□□□ 0.23
Cpt1aP97742 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cpt1aP97742 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cpt1aP97742 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.52■□□□□ 0.23
Cpt1aP97742 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpt1aP97742 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpt1aP97742 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpt1aP97742 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpt1aP97742 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cpt1aP97742 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
Cpt1aP97742 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpt1aP97742 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpt1aP97742 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cpt1aP97742 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Cpt1aP97742 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.51■□□□□ 0.23
Cpt1aP97742 Gm18958-201ENSMUST00000174258 762 ntBASIC16.51■□□□□ 0.23
Cpt1aP97742 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.51■□□□□ 0.23
Cpt1aP97742 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cpt1aP97742 Gm18032-201ENSMUST00000222541 538 ntBASIC16.51■□□□□ 0.23
Cpt1aP97742 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cpt1aP97742 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpt1aP97742 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpt1aP97742 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cpt1aP97742 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Cpt1aP97742 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cpt1aP97742 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpt1aP97742 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cpt1aP97742 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpt1aP97742 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpt1aP97742 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
Cpt1aP97742 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cpt1aP97742 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cpt1aP97742 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.5■□□□□ 0.23
Cpt1aP97742 Gm7370-201ENSMUST00000219471 767 ntBASIC16.5■□□□□ 0.23
Cpt1aP97742 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpt1aP97742 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cpt1aP97742 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpt1aP97742 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpt1aP97742 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cpt1aP97742 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cpt1aP97742 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpt1aP97742 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpt1aP97742 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpt1aP97742 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cpt1aP97742 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpt1aP97742 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Cpt1aP97742 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cpt1aP97742 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cpt1aP97742 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cpt1aP97742 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpt1aP97742 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms