Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cacna1aP97445 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cacna1aP97445 Gm8097-201ENSMUST00000117903 829 ntBASIC15.62■□□□□ 0.09
Cacna1aP97445 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.62■□□□□ 0.09
Cacna1aP97445 Mir5126-201ENSMUST00000175513 77 ntBASIC15.62■□□□□ 0.09
Cacna1aP97445 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cacna1aP97445 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.62■□□□□ 0.09
Cacna1aP97445 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cacna1aP97445 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cacna1aP97445 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.62■□□□□ 0.09
Cacna1aP97445 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cacna1aP97445 Gm2756-201ENSMUST00000195851 400 ntBASIC15.62■□□□□ 0.09
Cacna1aP97445 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1aP97445 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1aP97445 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1aP97445 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1aP97445 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.61■□□□□ 0.09
Cacna1aP97445 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1aP97445 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1aP97445 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1aP97445 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Cacna1aP97445 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1aP97445 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1aP97445 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1aP97445 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1aP97445 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1aP97445 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1aP97445 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.61■□□□□ 0.09
Cacna1aP97445 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1aP97445 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1aP97445 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1aP97445 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1aP97445 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cacna1aP97445 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Cacna1aP97445 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.61■□□□□ 0.09
Cacna1aP97445 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.61■□□□□ 0.09
Cacna1aP97445 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.61■□□□□ 0.09
Cacna1aP97445 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1aP97445 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.61■□□□□ 0.09
Cacna1aP97445 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1aP97445 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1aP97445 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Cacna1aP97445 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cacna1aP97445 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.6■□□□□ 0.09
Cacna1aP97445 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.6■□□□□ 0.09
Cacna1aP97445 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cacna1aP97445 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cacna1aP97445 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.6■□□□□ 0.09
Cacna1aP97445 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cacna1aP97445 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cacna1aP97445 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Cacna1aP97445 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.6■□□□□ 0.09
Cacna1aP97445 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cacna1aP97445 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cacna1aP97445 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cacna1aP97445 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cacna1aP97445 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Cacna1aP97445 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cacna1aP97445 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cacna1aP97445 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Cacna1aP97445 Gm8000-201ENSMUST00000188378 592 ntBASIC15.6■□□□□ 0.09
Cacna1aP97445 Gm5364-201ENSMUST00000216789 889 ntBASIC15.6■□□□□ 0.09
Cacna1aP97445 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1aP97445 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1aP97445 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1aP97445 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1aP97445 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Cacna1aP97445 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1aP97445 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1aP97445 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.59■□□□□ 0.09
Cacna1aP97445 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1aP97445 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1aP97445 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1aP97445 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1aP97445 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1aP97445 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Cacna1aP97445 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1aP97445 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1aP97445 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Cacna1aP97445 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1aP97445 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.59■□□□□ 0.09
Cacna1aP97445 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1aP97445 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1aP97445 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1aP97445 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1aP97445 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1aP97445 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.59■□□□□ 0.09
Cacna1aP97445 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.59■□□□□ 0.09
Cacna1aP97445 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Cacna1aP97445 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cacna1aP97445 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cacna1aP97445 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.09
Cacna1aP97445 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cacna1aP97445 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.58■□□□□ 0.09
Cacna1aP97445 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Cacna1aP97445 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cacna1aP97445 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cacna1aP97445 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Cacna1aP97445 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cacna1aP97445 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms