Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh6P97326 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh6P97326 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh6P97326 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cdh6P97326 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cdh6P97326 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh6P97326 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh6P97326 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh6P97326 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.18■□□□□ 0.34
Cdh6P97326 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh6P97326 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh6P97326 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cdh6P97326 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.18■□□□□ 0.34
Cdh6P97326 Gm13474-201ENSMUST00000122466 815 ntBASIC17.18■□□□□ 0.34
Cdh6P97326 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.18■□□□□ 0.34
Cdh6P97326 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh6P97326 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh6P97326 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh6P97326 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.18■□□□□ 0.34
Cdh6P97326 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh6P97326 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh6P97326 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh6P97326 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh6P97326 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh6P97326 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh6P97326 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Cdh6P97326 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh6P97326 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cdh6P97326 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh6P97326 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh6P97326 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.17■□□□□ 0.34
Cdh6P97326 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Cdh6P97326 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Cdh6P97326 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh6P97326 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh6P97326 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh6P97326 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.17■□□□□ 0.34
Cdh6P97326 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh6P97326 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh6P97326 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh6P97326 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh6P97326 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh6P97326 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.16■□□□□ 0.34
Cdh6P97326 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.16■□□□□ 0.34
Cdh6P97326 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Cdh6P97326 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh6P97326 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh6P97326 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.16■□□□□ 0.34
Cdh6P97326 Gm7889-201ENSMUST00000185591 958 ntBASIC17.16■□□□□ 0.34
Cdh6P97326 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.16■□□□□ 0.34
Cdh6P97326 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh6P97326 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh6P97326 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh6P97326 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.16■□□□□ 0.34
Cdh6P97326 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cdh6P97326 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh6P97326 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh6P97326 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.16■□□□□ 0.34
Cdh6P97326 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cdh6P97326 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh6P97326 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh6P97326 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh6P97326 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh6P97326 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh6P97326 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh6P97326 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.15■□□□□ 0.34
Cdh6P97326 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh6P97326 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh6P97326 Gm6433-201ENSMUST00000118634 875 ntBASIC17.15■□□□□ 0.34
Cdh6P97326 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
Cdh6P97326 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh6P97326 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.15■□□□□ 0.34
Cdh6P97326 Gm7370-201ENSMUST00000219471 767 ntBASIC17.15■□□□□ 0.34
Cdh6P97326 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cdh6P97326 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh6P97326 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cdh6P97326 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh6P97326 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh6P97326 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh6P97326 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Cdh6P97326 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.14■□□□□ 0.33
Cdh6P97326 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh6P97326 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cdh6P97326 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh6P97326 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh6P97326 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cdh6P97326 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Cdh6P97326 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.14■□□□□ 0.33
Cdh6P97326 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh6P97326 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh6P97326 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cdh6P97326 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh6P97326 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh6P97326 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh6P97326 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cdh6P97326 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Cdh6P97326 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh6P97326 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh6P97326 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cdh6P97326 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms