Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CiitaP79621 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CiitaP79621 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CiitaP79621 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CiitaP79621 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
CiitaP79621 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.39■□□□□ 0.54
CiitaP79621 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CiitaP79621 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CiitaP79621 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CiitaP79621 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CiitaP79621 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CiitaP79621 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.39■□□□□ 0.53
CiitaP79621 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.39■□□□□ 0.53
CiitaP79621 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CiitaP79621 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CiitaP79621 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CiitaP79621 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CiitaP79621 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CiitaP79621 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.39■□□□□ 0.53
CiitaP79621 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
CiitaP79621 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CiitaP79621 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CiitaP79621 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.39■□□□□ 0.53
CiitaP79621 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CiitaP79621 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CiitaP79621 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CiitaP79621 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.38■□□□□ 0.53
CiitaP79621 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CiitaP79621 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CiitaP79621 Rarb-207ENSMUST00000225921 2756 ntBASIC18.38■□□□□ 0.53
CiitaP79621 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CiitaP79621 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CiitaP79621 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CiitaP79621 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.38■□□□□ 0.53
CiitaP79621 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CiitaP79621 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CiitaP79621 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CiitaP79621 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CiitaP79621 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CiitaP79621 Gm17808-201ENSMUST00000200859 894 ntBASIC18.38■□□□□ 0.53
CiitaP79621 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CiitaP79621 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CiitaP79621 Phf7-203ENSMUST00000226565 1971 ntBASIC18.38■□□□□ 0.53
CiitaP79621 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CiitaP79621 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CiitaP79621 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CiitaP79621 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CiitaP79621 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CiitaP79621 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CiitaP79621 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CiitaP79621 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CiitaP79621 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CiitaP79621 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CiitaP79621 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CiitaP79621 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CiitaP79621 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.37■□□□□ 0.53
CiitaP79621 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CiitaP79621 Gm7367-201ENSMUST00000057611 492 ntBASIC18.37■□□□□ 0.53
CiitaP79621 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CiitaP79621 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CiitaP79621 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CiitaP79621 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CiitaP79621 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CiitaP79621 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CiitaP79621 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CiitaP79621 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CiitaP79621 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CiitaP79621 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CiitaP79621 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CiitaP79621 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CiitaP79621 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CiitaP79621 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CiitaP79621 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CiitaP79621 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CiitaP79621 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
CiitaP79621 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.36■□□□□ 0.53
CiitaP79621 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CiitaP79621 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.36■□□□□ 0.53
CiitaP79621 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CiitaP79621 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CiitaP79621 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CiitaP79621 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CiitaP79621 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CiitaP79621 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.36■□□□□ 0.53
CiitaP79621 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.36■□□□□ 0.53
CiitaP79621 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.36■□□□□ 0.53
CiitaP79621 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.36■□□□□ 0.53
CiitaP79621 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CiitaP79621 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CiitaP79621 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CiitaP79621 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CiitaP79621 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CiitaP79621 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CiitaP79621 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CiitaP79621 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CiitaP79621 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CiitaP79621 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CiitaP79621 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CiitaP79621 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CiitaP79621 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms