Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp9xP70398 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp9xP70398 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp9xP70398 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp9xP70398 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp9xP70398 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.02□□□□□ -0.16
Usp9xP70398 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.02□□□□□ -0.16
Usp9xP70398 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.02□□□□□ -0.16
Usp9xP70398 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Usp9xP70398 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp9xP70398 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usp9xP70398 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.02□□□□□ -0.16
Usp9xP70398 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp9xP70398 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp9xP70398 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Usp9xP70398 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp9xP70398 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Usp9xP70398 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp9xP70398 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Usp9xP70398 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp9xP70398 Gm15173-201ENSMUST00000122049 433 ntBASIC14.02□□□□□ -0.17
Usp9xP70398 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp9xP70398 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp9xP70398 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.02□□□□□ -0.17
Usp9xP70398 Gm43006-201ENSMUST00000197702 1602 ntBASIC14.02□□□□□ -0.17
Usp9xP70398 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp9xP70398 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp9xP70398 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Usp9xP70398 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp9xP70398 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp9xP70398 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.01□□□□□ -0.17
Usp9xP70398 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp9xP70398 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp9xP70398 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp9xP70398 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp9xP70398 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp9xP70398 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp9xP70398 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp9xP70398 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.01□□□□□ -0.17
Usp9xP70398 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.01□□□□□ -0.17
Usp9xP70398 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp9xP70398 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp9xP70398 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp9xP70398 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Usp9xP70398 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp9xP70398 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp9xP70398 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14□□□□□ -0.17
Usp9xP70398 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14□□□□□ -0.17
Usp9xP70398 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Usp9xP70398 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp9xP70398 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp9xP70398 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp9xP70398 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp9xP70398 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Usp9xP70398 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp9xP70398 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Usp9xP70398 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp9xP70398 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Usp9xP70398 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp9xP70398 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp9xP70398 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp9xP70398 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp9xP70398 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Usp9xP70398 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14□□□□□ -0.17
Usp9xP70398 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp9xP70398 Gm25990-201ENSMUST00000102440 86 ntBASIC14□□□□□ -0.17
Usp9xP70398 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp9xP70398 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14□□□□□ -0.17
Usp9xP70398 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp9xP70398 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Usp9xP70398 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp9xP70398 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp9xP70398 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp9xP70398 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp9xP70398 Gm12260-201ENSMUST00000122447 411 ntBASIC13.99□□□□□ -0.17
Usp9xP70398 Gm27000-201ENSMUST00000182943 842 ntBASIC13.99□□□□□ -0.17
Usp9xP70398 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.99□□□□□ -0.17
Usp9xP70398 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp9xP70398 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp9xP70398 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp9xP70398 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp9xP70398 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp9xP70398 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp9xP70398 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp9xP70398 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp9xP70398 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.99□□□□□ -0.17
Usp9xP70398 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
Usp9xP70398 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp9xP70398 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp9xP70398 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp9xP70398 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp9xP70398 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp9xP70398 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC13.99□□□□□ -0.17
Usp9xP70398 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp9xP70398 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp9xP70398 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp9xP70398 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp9xP70398 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp9xP70398 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp9xP70398 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms