Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1bP61025 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1bP61025 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1bP61025 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cks1bP61025 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1bP61025 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.13□□□□□ -0.47
Cks1bP61025 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1bP61025 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.13□□□□□ -0.47
Cks1bP61025 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1bP61025 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1bP61025 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cks1bP61025 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1bP61025 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1bP61025 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1bP61025 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1bP61025 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1bP61025 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cks1bP61025 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC12.12□□□□□ -0.47
Cks1bP61025 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.12□□□□□ -0.47
Cks1bP61025 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Cks1bP61025 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Cks1bP61025 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC12.12□□□□□ -0.47
Cks1bP61025 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 AC107452.1-201ENSMUST00000227963 481 ntBASIC12.12□□□□□ -0.47
Cks1bP61025 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cks1bP61025 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cks1bP61025 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cks1bP61025 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Cks1bP61025 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.12□□□□□ -0.47
Cks1bP61025 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1bP61025 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 Gm14281-201ENSMUST00000121700 1294 ntBASIC12.11□□□□□ -0.47
Cks1bP61025 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Cks1bP61025 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC12.11□□□□□ -0.47
Cks1bP61025 Gm8969-201ENSMUST00000199694 526 ntBASIC12.11□□□□□ -0.47
Cks1bP61025 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC12.11□□□□□ -0.47
Cks1bP61025 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Cks1bP61025 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC12.11□□□□□ -0.47
Cks1bP61025 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cks1bP61025 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cks1bP61025 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cks1bP61025 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC12.11□□□□□ -0.47
Cks1bP61025 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1bP61025 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1bP61025 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.1□□□□□ -0.47
Cks1bP61025 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1bP61025 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cks1bP61025 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1bP61025 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms