Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh5P55284 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh5P55284 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.52■□□□□ 0.24
Cdh5P55284 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.52■□□□□ 0.24
Cdh5P55284 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Cdh5P55284 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh5P55284 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh5P55284 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh5P55284 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh5P55284 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh5P55284 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Cdh5P55284 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Cdh5P55284 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Cdh5P55284 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cdh5P55284 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh5P55284 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh5P55284 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh5P55284 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cdh5P55284 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh5P55284 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.51■□□□□ 0.23
Cdh5P55284 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh5P55284 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.51■□□□□ 0.23
Cdh5P55284 Gm15375-201ENSMUST00000119510 849 ntBASIC16.51■□□□□ 0.23
Cdh5P55284 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.51■□□□□ 0.23
Cdh5P55284 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh5P55284 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh5P55284 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh5P55284 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh5P55284 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh5P55284 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh5P55284 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh5P55284 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
Cdh5P55284 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh5P55284 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh5P55284 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.5■□□□□ 0.23
Cdh5P55284 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh5P55284 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh5P55284 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh5P55284 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Cdh5P55284 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cdh5P55284 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh5P55284 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh5P55284 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh5P55284 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh5P55284 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh5P55284 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cdh5P55284 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh5P55284 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cdh5P55284 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh5P55284 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.5■□□□□ 0.23
Cdh5P55284 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.5■□□□□ 0.23
Cdh5P55284 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh5P55284 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh5P55284 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh5P55284 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh5P55284 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh5P55284 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh5P55284 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh5P55284 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh5P55284 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh5P55284 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh5P55284 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh5P55284 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh5P55284 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh5P55284 Mir1199-201ENSMUST00000117015 119 ntBASIC16.49■□□□□ 0.23
Cdh5P55284 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.49■□□□□ 0.23
Cdh5P55284 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cdh5P55284 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.49■□□□□ 0.23
Cdh5P55284 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.49■□□□□ 0.23
Cdh5P55284 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh5P55284 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh5P55284 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh5P55284 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh5P55284 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh5P55284 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh5P55284 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cdh5P55284 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh5P55284 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh5P55284 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh5P55284 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh5P55284 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh5P55284 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh5P55284 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh5P55284 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh5P55284 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Cdh5P55284 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Cdh5P55284 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh5P55284 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh5P55284 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.48■□□□□ 0.23
Cdh5P55284 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh5P55284 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh5P55284 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh5P55284 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh5P55284 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh5P55284 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.48■□□□□ 0.23
Cdh5P55284 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.48■□□□□ 0.23
Cdh5P55284 Gm42545-201ENSMUST00000202755 922 ntBASIC16.48■□□□□ 0.23
Cdh5P55284 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Cdh5P55284 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh5P55284 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms