Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nub1P54729 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nub1P54729 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nub1P54729 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Nub1P54729 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.25■□□□□ 0.51
Nub1P54729 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.25■□□□□ 0.51
Nub1P54729 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Nub1P54729 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nub1P54729 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Nub1P54729 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nub1P54729 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nub1P54729 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nub1P54729 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nub1P54729 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.24■□□□□ 0.51
Nub1P54729 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nub1P54729 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.24■□□□□ 0.51
Nub1P54729 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nub1P54729 Gm13559-201ENSMUST00000120476 863 ntBASIC18.24■□□□□ 0.51
Nub1P54729 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.24■□□□□ 0.51
Nub1P54729 Gm43799-201ENSMUST00000201845 579 ntBASIC18.24■□□□□ 0.51
Nub1P54729 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nub1P54729 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nub1P54729 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nub1P54729 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nub1P54729 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Nub1P54729 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nub1P54729 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nub1P54729 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nub1P54729 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Nub1P54729 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nub1P54729 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.23■□□□□ 0.51
Nub1P54729 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.23■□□□□ 0.51
Nub1P54729 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nub1P54729 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nub1P54729 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Nub1P54729 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.23■□□□□ 0.51
Nub1P54729 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Nub1P54729 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nub1P54729 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nub1P54729 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nub1P54729 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Nub1P54729 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nub1P54729 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nub1P54729 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nub1P54729 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nub1P54729 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nub1P54729 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nub1P54729 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nub1P54729 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Nub1P54729 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nub1P54729 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nub1P54729 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Nub1P54729 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nub1P54729 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nub1P54729 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nub1P54729 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nub1P54729 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nub1P54729 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.22■□□□□ 0.51
Nub1P54729 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nub1P54729 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nub1P54729 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Nub1P54729 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nub1P54729 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nub1P54729 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nub1P54729 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nub1P54729 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nub1P54729 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nub1P54729 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Nub1P54729 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nub1P54729 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nub1P54729 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nub1P54729 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nub1P54729 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nub1P54729 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Nub1P54729 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.21■□□□□ 0.51
Nub1P54729 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nub1P54729 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nub1P54729 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nub1P54729 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nub1P54729 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nub1P54729 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Nub1P54729 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Nub1P54729 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nub1P54729 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.2■□□□□ 0.5
Nub1P54729 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nub1P54729 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nub1P54729 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nub1P54729 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nub1P54729 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nub1P54729 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nub1P54729 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Nub1P54729 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nub1P54729 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.2■□□□□ 0.5
Nub1P54729 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nub1P54729 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nub1P54729 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.2■□□□□ 0.5
Nub1P54729 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nub1P54729 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nub1P54729 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nub1P54729 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms