Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.75■□□□□ 0.75
Cacnb3P54285 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cacnb3P54285 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cacnb3P54285 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.75■□□□□ 0.75
Cacnb3P54285 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cacnb3P54285 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cacnb3P54285 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cacnb3P54285 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cacnb3P54285 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cacnb3P54285 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cacnb3P54285 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Cacnb3P54285 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cacnb3P54285 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cacnb3P54285 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cacnb3P54285 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cacnb3P54285 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cacnb3P54285 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.74■□□□□ 0.75
Cacnb3P54285 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cacnb3P54285 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cacnb3P54285 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cacnb3P54285 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cacnb3P54285 Gm11452-201ENSMUST00000122376 690 ntBASIC19.74■□□□□ 0.75
Cacnb3P54285 Gm44450-201ENSMUST00000199528 114 ntBASIC19.74■□□□□ 0.75
Cacnb3P54285 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cacnb3P54285 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cacnb3P54285 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cacnb3P54285 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cacnb3P54285 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cacnb3P54285 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacnb3P54285 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacnb3P54285 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacnb3P54285 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacnb3P54285 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacnb3P54285 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacnb3P54285 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.73■□□□□ 0.75
Cacnb3P54285 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cacnb3P54285 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cacnb3P54285 Mir8098-201ENSMUST00000184011 137 ntBASIC19.73■□□□□ 0.75
Cacnb3P54285 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cacnb3P54285 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.73■□□□□ 0.75
Cacnb3P54285 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacnb3P54285 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacnb3P54285 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacnb3P54285 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacnb3P54285 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cacnb3P54285 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacnb3P54285 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Cacnb3P54285 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.73■□□□□ 0.75
Cacnb3P54285 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
Cacnb3P54285 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacnb3P54285 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cacnb3P54285 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacnb3P54285 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cacnb3P54285 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.72■□□□□ 0.75
Cacnb3P54285 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.72■□□□□ 0.75
Cacnb3P54285 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.72■□□□□ 0.75
Cacnb3P54285 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacnb3P54285 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacnb3P54285 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.72■□□□□ 0.75
Cacnb3P54285 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.72■□□□□ 0.75
Cacnb3P54285 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.72■□□□□ 0.75
Cacnb3P54285 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacnb3P54285 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cacnb3P54285 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cacnb3P54285 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacnb3P54285 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacnb3P54285 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Cacnb3P54285 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.72■□□□□ 0.75
Cacnb3P54285 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacnb3P54285 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacnb3P54285 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Cacnb3P54285 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacnb3P54285 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacnb3P54285 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacnb3P54285 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacnb3P54285 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.71■□□□□ 0.75
Cacnb3P54285 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacnb3P54285 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cacnb3P54285 Gm18421-201ENSMUST00000204122 625 ntBASIC19.71■□□□□ 0.75
Cacnb3P54285 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.71■□□□□ 0.75
Cacnb3P54285 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.71■□□□□ 0.75
Cacnb3P54285 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
Cacnb3P54285 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacnb3P54285 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacnb3P54285 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacnb3P54285 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacnb3P54285 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cacnb3P54285 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cacnb3P54285 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.7■□□□□ 0.74
Cacnb3P54285 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.7■□□□□ 0.74
Cacnb3P54285 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacnb3P54285 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cacnb3P54285 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacnb3P54285 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacnb3P54285 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Cacnb3P54285 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb3P54285 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.69■□□□□ 0.74
Cacnb3P54285 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb3P54285 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb3P54285 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms