Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atxn1P54254 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Atxn1P54254 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Atxn1P54254 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atxn1P54254 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atxn1P54254 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atxn1P54254 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atxn1P54254 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atxn1P54254 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Atxn1P54254 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Atxn1P54254 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atxn1P54254 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.79■□□□□ 0.28
Atxn1P54254 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atxn1P54254 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.79■□□□□ 0.28
Atxn1P54254 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Atxn1P54254 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Atxn1P54254 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atxn1P54254 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atxn1P54254 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Atxn1P54254 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atxn1P54254 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Atxn1P54254 Gm18195-201ENSMUST00000207604 706 ntBASIC16.79■□□□□ 0.28
Atxn1P54254 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Atxn1P54254 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atxn1P54254 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Atxn1P54254 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atxn1P54254 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Atxn1P54254 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atxn1P54254 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atxn1P54254 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atxn1P54254 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atxn1P54254 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atxn1P54254 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Atxn1P54254 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.78■□□□□ 0.28
Atxn1P54254 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Atxn1P54254 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atxn1P54254 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atxn1P54254 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Atxn1P54254 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Atxn1P54254 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.78■□□□□ 0.28
Atxn1P54254 Gm37722-201ENSMUST00000193757 208 ntBASIC16.78■□□□□ 0.28
Atxn1P54254 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.78■□□□□ 0.28
Atxn1P54254 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atxn1P54254 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.78■□□□□ 0.28
Atxn1P54254 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atxn1P54254 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Atxn1P54254 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atxn1P54254 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Atxn1P54254 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atxn1P54254 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Atxn1P54254 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.77■□□□□ 0.28
Atxn1P54254 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Atxn1P54254 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Atxn1P54254 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Atxn1P54254 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atxn1P54254 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atxn1P54254 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atxn1P54254 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Atxn1P54254 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Atxn1P54254 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Atxn1P54254 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Atxn1P54254 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Atxn1P54254 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
Atxn1P54254 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Atxn1P54254 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atxn1P54254 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Atxn1P54254 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atxn1P54254 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atxn1P54254 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atxn1P54254 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atxn1P54254 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atxn1P54254 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atxn1P54254 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atxn1P54254 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Atxn1P54254 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.76■□□□□ 0.27
Atxn1P54254 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atxn1P54254 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.76■□□□□ 0.27
Atxn1P54254 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atxn1P54254 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.76■□□□□ 0.27
Atxn1P54254 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atxn1P54254 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atxn1P54254 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atxn1P54254 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atxn1P54254 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atxn1P54254 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atxn1P54254 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atxn1P54254 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atxn1P54254 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Atxn1P54254 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.75■□□□□ 0.27
Atxn1P54254 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Atxn1P54254 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Atxn1P54254 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atxn1P54254 Gm10052-201ENSMUST00000168019 960 ntBASIC16.75■□□□□ 0.27
Atxn1P54254 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.75■□□□□ 0.27
Atxn1P54254 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Atxn1P54254 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.75■□□□□ 0.27
Atxn1P54254 Gm7729-201ENSMUST00000050143 801 ntBASIC16.75■□□□□ 0.27
Atxn1P54254 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Atxn1P54254 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atxn1P54254 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms