Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox1P53783 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox1P53783 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox1P53783 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.32■□□□□ 0.36
Sox1P53783 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sox1P53783 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sox1P53783 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.31■□□□□ 0.36
Sox1P53783 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox1P53783 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox1P53783 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.31■□□□□ 0.36
Sox1P53783 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
Sox1P53783 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Sox1P53783 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.31■□□□□ 0.36
Sox1P53783 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox1P53783 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.31■□□□□ 0.36
Sox1P53783 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.31■□□□□ 0.36
Sox1P53783 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox1P53783 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox1P53783 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox1P53783 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox1P53783 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox1P53783 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox1P53783 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.3■□□□□ 0.36
Sox1P53783 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox1P53783 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox1P53783 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox1P53783 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox1P53783 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox1P53783 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox1P53783 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.3■□□□□ 0.36
Sox1P53783 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sox1P53783 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sox1P53783 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.3■□□□□ 0.36
Sox1P53783 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.3■□□□□ 0.36
Sox1P53783 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Sox1P53783 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox1P53783 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox1P53783 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sox1P53783 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sox1P53783 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.3■□□□□ 0.36
Sox1P53783 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.3■□□□□ 0.36
Sox1P53783 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sox1P53783 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sox1P53783 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sox1P53783 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox1P53783 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.29■□□□□ 0.36
Sox1P53783 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox1P53783 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.29■□□□□ 0.36
Sox1P53783 AV026068-213ENSMUST00000223675 1171 ntBASIC17.29■□□□□ 0.36
Sox1P53783 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox1P53783 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Sox1P53783 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Sox1P53783 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sox1P53783 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox1P53783 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Sox1P53783 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Sox1P53783 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox1P53783 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox1P53783 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox1P53783 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sox1P53783 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox1P53783 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox1P53783 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.28■□□□□ 0.36
Sox1P53783 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.28■□□□□ 0.36
Sox1P53783 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sox1P53783 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.28■□□□□ 0.36
Sox1P53783 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox1P53783 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox1P53783 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.28■□□□□ 0.36
Sox1P53783 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Sox1P53783 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox1P53783 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox1P53783 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox1P53783 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Sox1P53783 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox1P53783 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox1P53783 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Sox1P53783 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox1P53783 Gm13036-201ENSMUST00000117799 748 ntBASIC17.27■□□□□ 0.36
Sox1P53783 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox1P53783 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sox1P53783 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.27■□□□□ 0.36
Sox1P53783 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sox1P53783 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Sox1P53783 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox1P53783 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.27■□□□□ 0.36
Sox1P53783 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Sox1P53783 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox1P53783 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox1P53783 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sox1P53783 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox1P53783 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox1P53783 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox1P53783 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.26■□□□□ 0.35
Sox1P53783 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox1P53783 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Sox1P53783 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox1P53783 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox1P53783 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox1P53783 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms