Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SftpbP50405 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SftpbP50405 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SftpbP50405 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SftpbP50405 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.38■□□□□ 0.37
SftpbP50405 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SftpbP50405 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SftpbP50405 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SftpbP50405 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SftpbP50405 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SftpbP50405 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SftpbP50405 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.38■□□□□ 0.37
SftpbP50405 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SftpbP50405 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.38■□□□□ 0.37
SftpbP50405 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SftpbP50405 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SftpbP50405 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SftpbP50405 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SftpbP50405 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SftpbP50405 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
SftpbP50405 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SftpbP50405 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SftpbP50405 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.38■□□□□ 0.37
SftpbP50405 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SftpbP50405 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SftpbP50405 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SftpbP50405 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SftpbP50405 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SftpbP50405 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
SftpbP50405 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SftpbP50405 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.37■□□□□ 0.37
SftpbP50405 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SftpbP50405 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SftpbP50405 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SftpbP50405 Gm15039-201ENSMUST00000118914 875 ntBASIC17.37■□□□□ 0.37
SftpbP50405 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.37■□□□□ 0.37
SftpbP50405 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SftpbP50405 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.37■□□□□ 0.37
SftpbP50405 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SftpbP50405 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SftpbP50405 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SftpbP50405 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SftpbP50405 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SftpbP50405 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SftpbP50405 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SftpbP50405 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SftpbP50405 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SftpbP50405 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SftpbP50405 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.37■□□□□ 0.37
SftpbP50405 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SftpbP50405 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SftpbP50405 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SftpbP50405 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SftpbP50405 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.36■□□□□ 0.37
SftpbP50405 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SftpbP50405 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SftpbP50405 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SftpbP50405 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.36■□□□□ 0.37
SftpbP50405 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SftpbP50405 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.36■□□□□ 0.37
SftpbP50405 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.36■□□□□ 0.37
SftpbP50405 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SftpbP50405 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SftpbP50405 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SftpbP50405 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SftpbP50405 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SftpbP50405 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SftpbP50405 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SftpbP50405 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SftpbP50405 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SftpbP50405 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SftpbP50405 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SftpbP50405 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SftpbP50405 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
SftpbP50405 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SftpbP50405 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SftpbP50405 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SftpbP50405 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SftpbP50405 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SftpbP50405 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.35■□□□□ 0.37
SftpbP50405 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SftpbP50405 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SftpbP50405 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SftpbP50405 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SftpbP50405 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SftpbP50405 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SftpbP50405 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SftpbP50405 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SftpbP50405 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SftpbP50405 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
SftpbP50405 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.34■□□□□ 0.37
SftpbP50405 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.34■□□□□ 0.37
SftpbP50405 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.34■□□□□ 0.37
SftpbP50405 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SftpbP50405 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SftpbP50405 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.34■□□□□ 0.37
SftpbP50405 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SftpbP50405 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SftpbP50405 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SftpbP50405 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms