Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
LtbrP50284 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LtbrP50284 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LtbrP50284 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LtbrP50284 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LtbrP50284 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LtbrP50284 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.85■□□□□ 0.77
LtbrP50284 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LtbrP50284 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.85■□□□□ 0.77
LtbrP50284 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.85■□□□□ 0.77
LtbrP50284 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
LtbrP50284 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LtbrP50284 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LtbrP50284 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LtbrP50284 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LtbrP50284 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LtbrP50284 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LtbrP50284 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LtbrP50284 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.84■□□□□ 0.77
LtbrP50284 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LtbrP50284 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LtbrP50284 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LtbrP50284 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LtbrP50284 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LtbrP50284 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
LtbrP50284 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LtbrP50284 Gm8000-201ENSMUST00000188378 592 ntBASIC19.84■□□□□ 0.77
LtbrP50284 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.84■□□□□ 0.77
LtbrP50284 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
LtbrP50284 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
LtbrP50284 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LtbrP50284 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LtbrP50284 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LtbrP50284 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LtbrP50284 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.84■□□□□ 0.77
LtbrP50284 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LtbrP50284 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LtbrP50284 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LtbrP50284 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LtbrP50284 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LtbrP50284 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LtbrP50284 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LtbrP50284 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LtbrP50284 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
LtbrP50284 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LtbrP50284 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.83■□□□□ 0.77
LtbrP50284 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LtbrP50284 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LtbrP50284 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LtbrP50284 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LtbrP50284 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LtbrP50284 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LtbrP50284 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.83■□□□□ 0.76
LtbrP50284 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LtbrP50284 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
LtbrP50284 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LtbrP50284 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LtbrP50284 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LtbrP50284 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LtbrP50284 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LtbrP50284 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LtbrP50284 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.82■□□□□ 0.76
LtbrP50284 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LtbrP50284 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.82■□□□□ 0.76
LtbrP50284 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LtbrP50284 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LtbrP50284 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LtbrP50284 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LtbrP50284 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LtbrP50284 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LtbrP50284 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LtbrP50284 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LtbrP50284 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LtbrP50284 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LtbrP50284 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LtbrP50284 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LtbrP50284 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LtbrP50284 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LtbrP50284 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LtbrP50284 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LtbrP50284 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LtbrP50284 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LtbrP50284 Gm2213-201ENSMUST00000197485 688 ntBASIC19.81■□□□□ 0.76
LtbrP50284 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.81■□□□□ 0.76
LtbrP50284 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LtbrP50284 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LtbrP50284 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LtbrP50284 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LtbrP50284 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
LtbrP50284 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.81■□□□□ 0.76
LtbrP50284 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LtbrP50284 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LtbrP50284 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LtbrP50284 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LtbrP50284 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LtbrP50284 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LtbrP50284 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LtbrP50284 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.8■□□□□ 0.76
LtbrP50284 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LtbrP50284 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms