Protein–RNA interactions for Protein: P49194

Rbp3, Retinol-binding protein 3, mousemouse

Predictions only

Length 1,234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbp3P49194 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.82■□□□□ 0.6
Rbp3P49194 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rbp3P49194 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rbp3P49194 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.82■□□□□ 0.6
Rbp3P49194 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rbp3P49194 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rbp3P49194 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rbp3P49194 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rbp3P49194 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Rbp3P49194 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rbp3P49194 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Rbp3P49194 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rbp3P49194 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rbp3P49194 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rbp3P49194 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rbp3P49194 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rbp3P49194 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rbp3P49194 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rbp3P49194 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rbp3P49194 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.81■□□□□ 0.6
Rbp3P49194 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rbp3P49194 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rbp3P49194 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rbp3P49194 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Rbp3P49194 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.81■□□□□ 0.6
Rbp3P49194 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rbp3P49194 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rbp3P49194 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rbp3P49194 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rbp3P49194 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rbp3P49194 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rbp3P49194 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rbp3P49194 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.8■□□□□ 0.6
Rbp3P49194 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.8■□□□□ 0.6
Rbp3P49194 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Rbp3P49194 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.8■□□□□ 0.6
Rbp3P49194 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.8■□□□□ 0.6
Rbp3P49194 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Rbp3P49194 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rbp3P49194 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rbp3P49194 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rbp3P49194 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rbp3P49194 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbp3P49194 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbp3P49194 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbp3P49194 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbp3P49194 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbp3P49194 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbp3P49194 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbp3P49194 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rbp3P49194 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbp3P49194 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbp3P49194 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbp3P49194 Gm13186-201ENSMUST00000118031 316 ntBASIC18.79■□□□□ 0.6
Rbp3P49194 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.79■□□□□ 0.6
Rbp3P49194 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbp3P49194 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbp3P49194 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rbp3P49194 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbp3P49194 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rbp3P49194 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rbp3P49194 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rbp3P49194 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.78■□□□□ 0.6
Rbp3P49194 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rbp3P49194 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rbp3P49194 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.78■□□□□ 0.6
Rbp3P49194 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.78■□□□□ 0.6
Rbp3P49194 Gm12895-201ENSMUST00000122214 226 ntBASIC18.78■□□□□ 0.6
Rbp3P49194 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rbp3P49194 Gm27459-201ENSMUST00000184860 107 ntBASIC18.78■□□□□ 0.6
Rbp3P49194 Gm5864-201ENSMUST00000202263 970 ntBASIC18.78■□□□□ 0.6
Rbp3P49194 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Rbp3P49194 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rbp3P49194 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rbp3P49194 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rbp3P49194 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rbp3P49194 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rbp3P49194 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rbp3P49194 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.77■□□□□ 0.6
Rbp3P49194 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbp3P49194 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbp3P49194 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Rbp3P49194 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Rbp3P49194 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbp3P49194 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Rbp3P49194 Gm43347-201ENSMUST00000200226 580 ntBASIC18.77■□□□□ 0.6
Rbp3P49194 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rbp3P49194 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbp3P49194 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.77■□□□□ 0.6
Rbp3P49194 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Rbp3P49194 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbp3P49194 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbp3P49194 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rbp3P49194 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rbp3P49194 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Rbp3P49194 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rbp3P49194 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rbp3P49194 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rbp3P49194 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rbp3P49194 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms