Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rph3aP47708 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rph3aP47708 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rph3aP47708 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rph3aP47708 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rph3aP47708 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rph3aP47708 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rph3aP47708 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rph3aP47708 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rph3aP47708 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rph3aP47708 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rph3aP47708 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.33■□□□□ 0.2
Rph3aP47708 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rph3aP47708 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rph3aP47708 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rph3aP47708 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rph3aP47708 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Rph3aP47708 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rph3aP47708 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rph3aP47708 Gm37055-201ENSMUST00000191866 133 ntBASIC16.33■□□□□ 0.2
Rph3aP47708 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.33■□□□□ 0.2
Rph3aP47708 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.33■□□□□ 0.2
Rph3aP47708 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rph3aP47708 Gm5417-201ENSMUST00000079706 384 ntBASIC16.33■□□□□ 0.2
Rph3aP47708 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rph3aP47708 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rph3aP47708 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rph3aP47708 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rph3aP47708 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rph3aP47708 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rph3aP47708 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rph3aP47708 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.33■□□□□ 0.2
Rph3aP47708 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rph3aP47708 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rph3aP47708 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Rph3aP47708 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.32■□□□□ 0.2
Rph3aP47708 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Rph3aP47708 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Rph3aP47708 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rph3aP47708 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rph3aP47708 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rph3aP47708 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rph3aP47708 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rph3aP47708 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rph3aP47708 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rph3aP47708 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rph3aP47708 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rph3aP47708 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rph3aP47708 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rph3aP47708 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rph3aP47708 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rph3aP47708 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rph3aP47708 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rph3aP47708 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rph3aP47708 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rph3aP47708 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rph3aP47708 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rph3aP47708 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rph3aP47708 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rph3aP47708 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rph3aP47708 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rph3aP47708 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.31■□□□□ 0.2
Rph3aP47708 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rph3aP47708 Il3ra-202ENSMUST00000223589 738 ntBASIC16.31■□□□□ 0.2
Rph3aP47708 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rph3aP47708 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rph3aP47708 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rph3aP47708 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rph3aP47708 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rph3aP47708 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rph3aP47708 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rph3aP47708 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rph3aP47708 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rph3aP47708 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rph3aP47708 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rph3aP47708 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rph3aP47708 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rph3aP47708 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.3■□□□□ 0.2
Rph3aP47708 Gm27463-201ENSMUST00000183569 57 ntBASIC16.3■□□□□ 0.2
Rph3aP47708 Gm10252-201ENSMUST00000209541 832 ntBASIC16.3■□□□□ 0.2
Rph3aP47708 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rph3aP47708 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rph3aP47708 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rph3aP47708 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rph3aP47708 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Rph3aP47708 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rph3aP47708 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Rph3aP47708 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rph3aP47708 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.3■□□□□ 0.2
Rph3aP47708 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rph3aP47708 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rph3aP47708 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rph3aP47708 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.3■□□□□ 0.2
Rph3aP47708 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rph3aP47708 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rph3aP47708 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rph3aP47708 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rph3aP47708 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rph3aP47708 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rph3aP47708 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms