Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Mmp9P41245 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.27□□□□□ -0.13
Mmp9P41245 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.27□□□□□ -0.13
Mmp9P41245 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Mmp9P41245 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Mmp9P41245 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp9P41245 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.27□□□□□ -0.13
Mmp9P41245 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp9P41245 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp9P41245 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp9P41245 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp9P41245 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp9P41245 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp9P41245 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp9P41245 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp9P41245 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Mmp9P41245 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp9P41245 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp9P41245 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp9P41245 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Mmp9P41245 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp9P41245 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp9P41245 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp9P41245 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.26□□□□□ -0.13
Mmp9P41245 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Mmp9P41245 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp9P41245 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp9P41245 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp9P41245 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp9P41245 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Mmp9P41245 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp9P41245 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp9P41245 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp9P41245 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp9P41245 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp9P41245 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp9P41245 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp9P41245 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp9P41245 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp9P41245 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp9P41245 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp9P41245 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Mmp9P41245 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp9P41245 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp9P41245 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp9P41245 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Mmp9P41245 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.25□□□□□ -0.13
Mmp9P41245 Gm12441-201ENSMUST00000121806 588 ntBASIC14.25□□□□□ -0.13
Mmp9P41245 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.25□□□□□ -0.13
Mmp9P41245 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Mmp9P41245 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp9P41245 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp9P41245 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp9P41245 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp9P41245 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp9P41245 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Mmp9P41245 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp9P41245 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp9P41245 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp9P41245 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp9P41245 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.25□□□□□ -0.13
Mmp9P41245 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp9P41245 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp9P41245 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp9P41245 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp9P41245 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp9P41245 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp9P41245 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Mmp9P41245 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp9P41245 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp9P41245 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp9P41245 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp9P41245 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp9P41245 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp9P41245 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.24□□□□□ -0.13
Mmp9P41245 Gm22240-201ENSMUST00000175225 82 ntBASIC14.24□□□□□ -0.13
Mmp9P41245 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp9P41245 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp9P41245 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.24□□□□□ -0.13
Mmp9P41245 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp9P41245 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp9P41245 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.24□□□□□ -0.13
Mmp9P41245 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp9P41245 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp9P41245 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp9P41245 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Mmp9P41245 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp9P41245 Reep4-203ENSMUST00000226563 1444 ntBASIC14.24□□□□□ -0.13
Mmp9P41245 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp9P41245 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp9P41245 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp9P41245 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp9P41245 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp9P41245 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Mmp9P41245 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp9P41245 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp9P41245 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp9P41245 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.23□□□□□ -0.13
Mmp9P41245 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp9P41245 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms