Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn1aP39689 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn1aP39689 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.01□□□□□ -0.17
Cdkn1aP39689 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.01□□□□□ -0.17
Cdkn1aP39689 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn1aP39689 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn1aP39689 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn1aP39689 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn1aP39689 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cdkn1aP39689 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdkn1aP39689 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdkn1aP39689 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdkn1aP39689 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdkn1aP39689 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cdkn1aP39689 Fcho2-208ENSMUST00000224992 2964 ntBASIC14□□□□□ -0.17
Cdkn1aP39689 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdkn1aP39689 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdkn1aP39689 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14□□□□□ -0.17
Cdkn1aP39689 Gm11355-201ENSMUST00000121120 306 ntBASIC14□□□□□ -0.17
Cdkn1aP39689 Gm9013-201ENSMUST00000132939 882 ntBASIC14□□□□□ -0.17
Cdkn1aP39689 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14□□□□□ -0.17
Cdkn1aP39689 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdkn1aP39689 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdkn1aP39689 Gm8969-201ENSMUST00000199694 526 ntBASIC14□□□□□ -0.17
Cdkn1aP39689 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdkn1aP39689 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdkn1aP39689 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdkn1aP39689 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdkn1aP39689 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdkn1aP39689 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdkn1aP39689 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdkn1aP39689 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdkn1aP39689 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdkn1aP39689 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdkn1aP39689 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdkn1aP39689 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cdkn1aP39689 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdkn1aP39689 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdkn1aP39689 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdkn1aP39689 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdkn1aP39689 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdkn1aP39689 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdkn1aP39689 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cdkn1aP39689 Gm5587-201ENSMUST00000206270 674 ntBASIC13.99□□□□□ -0.17
Cdkn1aP39689 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdkn1aP39689 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdkn1aP39689 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdkn1aP39689 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Cdkn1aP39689 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.99□□□□□ -0.17
Cdkn1aP39689 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdkn1aP39689 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdkn1aP39689 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdkn1aP39689 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdkn1aP39689 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cdkn1aP39689 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.98□□□□□ -0.17
Cdkn1aP39689 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Cdkn1aP39689 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdkn1aP39689 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.98□□□□□ -0.17
Cdkn1aP39689 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdkn1aP39689 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdkn1aP39689 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdkn1aP39689 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdkn1aP39689 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Cdkn1aP39689 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cdkn1aP39689 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdkn1aP39689 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdkn1aP39689 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cdkn1aP39689 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdkn1aP39689 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC13.98□□□□□ -0.17
Cdkn1aP39689 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cdkn1aP39689 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdkn1aP39689 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cdkn1aP39689 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cdkn1aP39689 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cdkn1aP39689 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cdkn1aP39689 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdkn1aP39689 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdkn1aP39689 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdkn1aP39689 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdkn1aP39689 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdkn1aP39689 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cdkn1aP39689 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdkn1aP39689 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdkn1aP39689 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
Cdkn1aP39689 Gm14859-201ENSMUST00000117752 357 ntBASIC13.97□□□□□ -0.17
Cdkn1aP39689 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.97□□□□□ -0.17
Cdkn1aP39689 Gm10819-201ENSMUST00000099988 561 ntBASIC13.97□□□□□ -0.17
Cdkn1aP39689 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdkn1aP39689 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdkn1aP39689 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Cdkn1aP39689 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdkn1aP39689 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdkn1aP39689 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Cdkn1aP39689 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdkn1aP39689 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdkn1aP39689 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cdkn1aP39689 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdkn1aP39689 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.96□□□□□ -0.17
Cdkn1aP39689 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdkn1aP39689 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms