Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Foxa1P35582 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Foxa1P35582 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.69■□□□□ 0.1
Foxa1P35582 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Foxa1P35582 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Foxa1P35582 Gm27000-201ENSMUST00000182943 842 ntBASIC15.69■□□□□ 0.1
Foxa1P35582 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.69■□□□□ 0.1
Foxa1P35582 Gm2274-201ENSMUST00000184539 609 ntBASIC15.69■□□□□ 0.1
Foxa1P35582 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Foxa1P35582 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxa1P35582 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Foxa1P35582 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxa1P35582 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxa1P35582 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxa1P35582 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Foxa1P35582 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Foxa1P35582 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxa1P35582 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxa1P35582 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxa1P35582 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxa1P35582 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Foxa1P35582 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxa1P35582 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Foxa1P35582 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxa1P35582 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.68■□□□□ 0.1
Foxa1P35582 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.68■□□□□ 0.1
Foxa1P35582 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Foxa1P35582 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Foxa1P35582 Gm7889-201ENSMUST00000185591 958 ntBASIC15.68■□□□□ 0.1
Foxa1P35582 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Foxa1P35582 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Foxa1P35582 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Foxa1P35582 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Foxa1P35582 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxa1P35582 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Foxa1P35582 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxa1P35582 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxa1P35582 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxa1P35582 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Foxa1P35582 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxa1P35582 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.67■□□□□ 0.1
Foxa1P35582 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxa1P35582 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxa1P35582 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxa1P35582 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Foxa1P35582 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxa1P35582 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Foxa1P35582 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxa1P35582 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Foxa1P35582 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Foxa1P35582 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.67■□□□□ 0.1
Foxa1P35582 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Foxa1P35582 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Foxa1P35582 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxa1P35582 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxa1P35582 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Foxa1P35582 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxa1P35582 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Foxa1P35582 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxa1P35582 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxa1P35582 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxa1P35582 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxa1P35582 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxa1P35582 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Foxa1P35582 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Foxa1P35582 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxa1P35582 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Foxa1P35582 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Foxa1P35582 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxa1P35582 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Foxa1P35582 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.66■□□□□ 0.1
Foxa1P35582 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.66■□□□□ 0.1
Foxa1P35582 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxa1P35582 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Foxa1P35582 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxa1P35582 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxa1P35582 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxa1P35582 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Foxa1P35582 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Foxa1P35582 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxa1P35582 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Foxa1P35582 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.66■□□□□ 0.1
Foxa1P35582 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Foxa1P35582 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Foxa1P35582 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxa1P35582 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxa1P35582 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Foxa1P35582 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.66■□□□□ 0.1
Foxa1P35582 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxa1P35582 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxa1P35582 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxa1P35582 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxa1P35582 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxa1P35582 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxa1P35582 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Foxa1P35582 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Foxa1P35582 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxa1P35582 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxa1P35582 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxa1P35582 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms