Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc6a1P31648 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Slc6a1P31648 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc6a1P31648 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc6a1P31648 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.63□□□□□ -0.07
Slc6a1P31648 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Slc6a1P31648 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc6a1P31648 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc6a1P31648 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc6a1P31648 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc6a1P31648 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Slc6a1P31648 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slc6a1P31648 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Slc6a1P31648 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slc6a1P31648 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Slc6a1P31648 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slc6a1P31648 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Slc6a1P31648 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slc6a1P31648 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slc6a1P31648 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Slc6a1P31648 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.62□□□□□ -0.07
Slc6a1P31648 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slc6a1P31648 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Slc6a1P31648 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Slc6a1P31648 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.62□□□□□ -0.07
Slc6a1P31648 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Slc6a1P31648 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc6a1P31648 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc6a1P31648 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc6a1P31648 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc6a1P31648 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc6a1P31648 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc6a1P31648 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.61□□□□□ -0.07
Slc6a1P31648 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Slc6a1P31648 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Slc6a1P31648 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc6a1P31648 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Slc6a1P31648 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.61□□□□□ -0.07
Slc6a1P31648 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.61□□□□□ -0.07
Slc6a1P31648 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Slc6a1P31648 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.61□□□□□ -0.07
Slc6a1P31648 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc6a1P31648 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Slc6a1P31648 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc6a1P31648 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc6a1P31648 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc6a1P31648 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc6a1P31648 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc6a1P31648 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Slc6a1P31648 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Slc6a1P31648 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Slc6a1P31648 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Slc6a1P31648 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Slc6a1P31648 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.61□□□□□ -0.07
Slc6a1P31648 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc6a1P31648 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a1P31648 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a1P31648 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a1P31648 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a1P31648 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a1P31648 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a1P31648 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a1P31648 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a1P31648 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a1P31648 Gm22325-201ENSMUST00000158904 308 ntBASIC14.6□□□□□ -0.07
Slc6a1P31648 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.6□□□□□ -0.07
Slc6a1P31648 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.6□□□□□ -0.07
Slc6a1P31648 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Slc6a1P31648 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a1P31648 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a1P31648 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Slc6a1P31648 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a1P31648 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Slc6a1P31648 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a1P31648 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Slc6a1P31648 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a1P31648 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a1P31648 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.59□□□□□ -0.07
Slc6a1P31648 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a1P31648 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a1P31648 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a1P31648 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a1P31648 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a1P31648 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Slc6a1P31648 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a1P31648 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a1P31648 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.59□□□□□ -0.07
Slc6a1P31648 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a1P31648 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a1P31648 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a1P31648 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a1P31648 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a1P31648 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a1P31648 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Slc6a1P31648 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Slc6a1P31648 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.58□□□□□ -0.07
Slc6a1P31648 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Slc6a1P31648 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a1P31648 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a1P31648 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms