Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Cd40P27512 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd40P27512 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd40P27512 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd40P27512 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd40P27512 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.34■□□□□ 0.05
Cd40P27512 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd40P27512 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd40P27512 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cd40P27512 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cd40P27512 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd40P27512 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.34■□□□□ 0.05
Cd40P27512 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cd40P27512 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd40P27512 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cd40P27512 Gm7889-201ENSMUST00000185591 958 ntBASIC15.34■□□□□ 0.05
Cd40P27512 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.34■□□□□ 0.05
Cd40P27512 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd40P27512 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd40P27512 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd40P27512 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd40P27512 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Cd40P27512 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cd40P27512 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cd40P27512 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd40P27512 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cd40P27512 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.33■□□□□ 0.05
Cd40P27512 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cd40P27512 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cd40P27512 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cd40P27512 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd40P27512 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.33■□□□□ 0.04
Cd40P27512 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd40P27512 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd40P27512 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd40P27512 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cd40P27512 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd40P27512 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cd40P27512 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cd40P27512 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd40P27512 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cd40P27512 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd40P27512 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.33■□□□□ 0.04
Cd40P27512 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd40P27512 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd40P27512 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd40P27512 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Cd40P27512 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd40P27512 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cd40P27512 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd40P27512 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd40P27512 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Cd40P27512 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.32■□□□□ 0.04
Cd40P27512 Gm6433-201ENSMUST00000118634 875 ntBASIC15.32■□□□□ 0.04
Cd40P27512 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.32■□□□□ 0.04
Cd40P27512 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cd40P27512 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cd40P27512 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.32■□□□□ 0.04
Cd40P27512 Gm18959-201ENSMUST00000208954 655 ntBASIC15.32■□□□□ 0.04
Cd40P27512 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.32■□□□□ 0.04
Cd40P27512 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Cd40P27512 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd40P27512 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.32■□□□□ 0.04
Cd40P27512 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cd40P27512 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cd40P27512 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd40P27512 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd40P27512 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cd40P27512 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd40P27512 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.32■□□□□ 0.04
Cd40P27512 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cd40P27512 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd40P27512 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cd40P27512 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Cd40P27512 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cd40P27512 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd40P27512 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cd40P27512 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cd40P27512 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd40P27512 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd40P27512 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cd40P27512 Gm45058-201ENSMUST00000205810 766 ntBASIC15.31■□□□□ 0.04
Cd40P27512 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd40P27512 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cd40P27512 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.31■□□□□ 0.04
Cd40P27512 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd40P27512 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd40P27512 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cd40P27512 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd40P27512 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd40P27512 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cd40P27512 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cd40P27512 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cd40P27512 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cd40P27512 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cd40P27512 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd40P27512 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.3■□□□□ 0.04
Cd40P27512 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd40P27512 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd40P27512 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms