Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Aldh1a1P24549 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Aldh1a1P24549 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Aldh1a1P24549 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Aldh1a1P24549 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Aldh1a1P24549 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Aldh1a1P24549 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Aldh1a1P24549 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Aldh1a1P24549 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Aldh1a1P24549 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.16■□□□□ 0.5
Aldh1a1P24549 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Aldh1a1P24549 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Aldh1a1P24549 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Aldh1a1P24549 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Aldh1a1P24549 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Aldh1a1P24549 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Aldh1a1P24549 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Aldh1a1P24549 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.16■□□□□ 0.5
Aldh1a1P24549 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Aldh1a1P24549 Gm2213-201ENSMUST00000197485 688 ntBASIC18.16■□□□□ 0.5
Aldh1a1P24549 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.16■□□□□ 0.5
Aldh1a1P24549 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Aldh1a1P24549 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Aldh1a1P24549 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Aldh1a1P24549 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Aldh1a1P24549 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Aldh1a1P24549 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Aldh1a1P24549 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Aldh1a1P24549 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Aldh1a1P24549 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Aldh1a1P24549 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Aldh1a1P24549 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Aldh1a1P24549 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Aldh1a1P24549 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.15■□□□□ 0.5
Aldh1a1P24549 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Aldh1a1P24549 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Aldh1a1P24549 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Aldh1a1P24549 Gm8000-201ENSMUST00000188378 592 ntBASIC18.15■□□□□ 0.5
Aldh1a1P24549 Gm37444-201ENSMUST00000193605 439 ntBASIC18.15■□□□□ 0.5
Aldh1a1P24549 Gm6296-201ENSMUST00000222599 943 ntBASIC18.15■□□□□ 0.5
Aldh1a1P24549 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Aldh1a1P24549 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Aldh1a1P24549 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Aldh1a1P24549 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Aldh1a1P24549 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Aldh1a1P24549 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Aldh1a1P24549 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Aldh1a1P24549 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Aldh1a1P24549 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Aldh1a1P24549 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Aldh1a1P24549 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Aldh1a1P24549 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Aldh1a1P24549 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Aldh1a1P24549 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Aldh1a1P24549 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Aldh1a1P24549 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Aldh1a1P24549 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.14■□□□□ 0.49
Aldh1a1P24549 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Aldh1a1P24549 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.14■□□□□ 0.49
Aldh1a1P24549 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Aldh1a1P24549 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Aldh1a1P24549 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.14■□□□□ 0.49
Aldh1a1P24549 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Aldh1a1P24549 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Aldh1a1P24549 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Aldh1a1P24549 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.14■□□□□ 0.49
Aldh1a1P24549 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Aldh1a1P24549 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Aldh1a1P24549 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Aldh1a1P24549 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Aldh1a1P24549 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.13■□□□□ 0.49
Aldh1a1P24549 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Aldh1a1P24549 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.13■□□□□ 0.49
Aldh1a1P24549 Gm15165-201ENSMUST00000118140 502 ntBASIC18.13■□□□□ 0.49
Aldh1a1P24549 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Aldh1a1P24549 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.13■□□□□ 0.49
Aldh1a1P24549 Mir5131-201ENSMUST00000175426 93 ntBASIC18.13■□□□□ 0.49
Aldh1a1P24549 Gm44450-201ENSMUST00000199528 114 ntBASIC18.13■□□□□ 0.49
Aldh1a1P24549 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Aldh1a1P24549 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Aldh1a1P24549 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Aldh1a1P24549 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Aldh1a1P24549 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Aldh1a1P24549 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Aldh1a1P24549 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Aldh1a1P24549 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Aldh1a1P24549 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Aldh1a1P24549 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Aldh1a1P24549 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Aldh1a1P24549 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Aldh1a1P24549 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Aldh1a1P24549 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Aldh1a1P24549 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Aldh1a1P24549 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.12■□□□□ 0.49
Aldh1a1P24549 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.12■□□□□ 0.49
Aldh1a1P24549 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Aldh1a1P24549 Gm44454-201ENSMUST00000198541 138 ntBASIC18.12■□□□□ 0.49
Aldh1a1P24549 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Aldh1a1P24549 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.12■□□□□ 0.49
Aldh1a1P24549 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms