Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxa4P06798 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxa4P06798 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxa4P06798 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
Hoxa4P06798 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxa4P06798 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxa4P06798 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxa4P06798 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxa4P06798 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Hoxa4P06798 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.68■□□□□ 0.26
Hoxa4P06798 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Hoxa4P06798 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxa4P06798 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Hoxa4P06798 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa4P06798 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa4P06798 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa4P06798 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa4P06798 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa4P06798 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa4P06798 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa4P06798 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa4P06798 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa4P06798 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa4P06798 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.67■□□□□ 0.26
Hoxa4P06798 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa4P06798 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa4P06798 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Hoxa4P06798 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa4P06798 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa4P06798 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Hoxa4P06798 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa4P06798 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa4P06798 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Hoxa4P06798 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.67■□□□□ 0.26
Hoxa4P06798 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Hoxa4P06798 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.67■□□□□ 0.26
Hoxa4P06798 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa4P06798 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Hoxa4P06798 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.67■□□□□ 0.26
Hoxa4P06798 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Hoxa4P06798 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa4P06798 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa4P06798 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa4P06798 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxa4P06798 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxa4P06798 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Hoxa4P06798 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxa4P06798 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Hoxa4P06798 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Hoxa4P06798 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxa4P06798 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxa4P06798 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.66■□□□□ 0.26
Hoxa4P06798 Gm9013-201ENSMUST00000132939 882 ntBASIC16.66■□□□□ 0.26
Hoxa4P06798 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxa4P06798 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxa4P06798 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxa4P06798 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxa4P06798 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxa4P06798 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxa4P06798 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxa4P06798 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxa4P06798 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Hoxa4P06798 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.66■□□□□ 0.26
Hoxa4P06798 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxa4P06798 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.66■□□□□ 0.26
Hoxa4P06798 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Hoxa4P06798 Phf7-203ENSMUST00000226565 1971 ntBASIC16.66■□□□□ 0.26
Hoxa4P06798 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Hoxa4P06798 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxa4P06798 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Hoxa4P06798 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxa4P06798 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Hoxa4P06798 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Hoxa4P06798 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxa4P06798 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxa4P06798 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxa4P06798 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.65■□□□□ 0.26
Hoxa4P06798 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.65■□□□□ 0.26
Hoxa4P06798 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxa4P06798 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxa4P06798 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.65■□□□□ 0.26
Hoxa4P06798 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.65■□□□□ 0.26
Hoxa4P06798 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.65■□□□□ 0.26
Hoxa4P06798 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxa4P06798 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Hoxa4P06798 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxa4P06798 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxa4P06798 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxa4P06798 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Hoxa4P06798 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxa4P06798 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa4P06798 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa4P06798 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa4P06798 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa4P06798 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.64■□□□□ 0.25
Hoxa4P06798 Gm44450-201ENSMUST00000199528 114 ntBASIC16.64■□□□□ 0.25
Hoxa4P06798 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa4P06798 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa4P06798 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa4P06798 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms