Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
P04940 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P04940 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P04940 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
P04940 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
P04940 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
P04940 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
P04940 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
P04940 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
P04940 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P04940 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.74□□□□□ -0.21
P04940 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
P04940 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
P04940 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
P04940 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P04940 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P04940 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
P04940 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P04940 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P04940 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P04940 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
P04940 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.74□□□□□ -0.21
P04940 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.74□□□□□ -0.21
P04940 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
P04940 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P04940 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P04940 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
P04940 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P04940 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P04940 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.74□□□□□ -0.21
P04940 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P04940 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P04940 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
P04940 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P04940 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.74□□□□□ -0.21
P04940 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.73□□□□□ -0.21
P04940 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
P04940 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
P04940 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
P04940 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
P04940 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P04940 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
P04940 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P04940 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P04940 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
P04940 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
P04940 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
P04940 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P04940 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
P04940 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P04940 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
P04940 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.73□□□□□ -0.21
P04940 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.73□□□□□ -0.21
P04940 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
P04940 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.73□□□□□ -0.21
P04940 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
P04940 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P04940 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P04940 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
P04940 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P04940 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
P04940 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P04940 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
P04940 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.73□□□□□ -0.21
P04940 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.73□□□□□ -0.21
P04940 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P04940 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P04940 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
P04940 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.72□□□□□ -0.21
P04940 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04940 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
P04940 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
P04940 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04940 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
P04940 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
P04940 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04940 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04940 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.72□□□□□ -0.21
P04940 Gm30025-201ENSMUST00000218555 728 ntBASIC13.72□□□□□ -0.21
P04940 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04940 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04940 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P04940 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.72□□□□□ -0.21
P04940 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04940 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04940 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04940 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P04940 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04940 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04940 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
P04940 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
P04940 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04940 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04940 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04940 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
P04940 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.71□□□□□ -0.21
P04940 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
P04940 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04940 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.71□□□□□ -0.21
P04940 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms