Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.44■□□□□ 0.38
P01878 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
P01878 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
P01878 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
P01878 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P01878 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P01878 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P01878 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.44■□□□□ 0.38
P01878 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.44■□□□□ 0.38
P01878 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
P01878 Gm28659-201ENSMUST00000188013 759 ntBASIC17.44■□□□□ 0.38
P01878 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P01878 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
P01878 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.44■□□□□ 0.38
P01878 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
P01878 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.44■□□□□ 0.38
P01878 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.43■□□□□ 0.38
P01878 Gm13312-201ENSMUST00000119631 718 ntBASIC17.43■□□□□ 0.38
P01878 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.43■□□□□ 0.38
P01878 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
P01878 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.43■□□□□ 0.38
P01878 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
P01878 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P01878 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.43■□□□□ 0.38
P01878 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
P01878 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P01878 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.42■□□□□ 0.38
P01878 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
P01878 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P01878 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P01878 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P01878 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
P01878 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P01878 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
P01878 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.42■□□□□ 0.38
P01878 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P01878 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
P01878 Mir8098-201ENSMUST00000184011 137 ntBASIC17.42■□□□□ 0.38
P01878 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P01878 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P01878 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.42■□□□□ 0.38
P01878 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.42■□□□□ 0.38
P01878 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P01878 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P01878 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
P01878 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
P01878 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.42■□□□□ 0.38
P01878 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P01878 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P01878 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P01878 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P01878 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P01878 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P01878 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.41■□□□□ 0.38
P01878 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P01878 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.41■□□□□ 0.38
P01878 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.41■□□□□ 0.38
P01878 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P01878 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.41■□□□□ 0.38
P01878 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.41■□□□□ 0.38
P01878 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P01878 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P01878 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P01878 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
P01878 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P01878 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.41■□□□□ 0.38
P01878 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
P01878 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
P01878 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
P01878 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P01878 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
P01878 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P01878 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
P01878 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P01878 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P01878 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms