Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TcraP01849 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TcraP01849 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TcraP01849 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TcraP01849 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TcraP01849 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TcraP01849 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.44□□□□□ -0.42
TcraP01849 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TcraP01849 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
TcraP01849 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TcraP01849 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TcraP01849 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
TcraP01849 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Gm13216-201ENSMUST00000117145 591 ntBASIC12.44□□□□□ -0.42
TcraP01849 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
TcraP01849 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC12.44□□□□□ -0.42
TcraP01849 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC12.44□□□□□ -0.42
TcraP01849 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
TcraP01849 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TcraP01849 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TcraP01849 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TcraP01849 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.43□□□□□ -0.42
TcraP01849 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TcraP01849 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TcraP01849 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TcraP01849 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TcraP01849 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TcraP01849 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TcraP01849 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TcraP01849 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TcraP01849 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TcraP01849 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TcraP01849 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
TcraP01849 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TcraP01849 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
TcraP01849 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC12.43□□□□□ -0.42
TcraP01849 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TcraP01849 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
TcraP01849 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
TcraP01849 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TcraP01849 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TcraP01849 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TcraP01849 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TcraP01849 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TcraP01849 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TcraP01849 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.43□□□□□ -0.42
TcraP01849 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TcraP01849 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TcraP01849 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TcraP01849 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TcraP01849 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TcraP01849 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TcraP01849 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TcraP01849 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
TcraP01849 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TcraP01849 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.42□□□□□ -0.42
TcraP01849 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TcraP01849 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TcraP01849 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TcraP01849 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TcraP01849 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TcraP01849 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
TcraP01849 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TcraP01849 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TcraP01849 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TcraP01849 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
TcraP01849 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC12.42□□□□□ -0.42
TcraP01849 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC12.42□□□□□ -0.42
TcraP01849 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms