Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Matn4O89029 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn4O89029 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.03■□□□□ 0.16
Matn4O89029 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn4O89029 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn4O89029 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn4O89029 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Matn4O89029 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn4O89029 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.03■□□□□ 0.16
Matn4O89029 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn4O89029 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn4O89029 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.03■□□□□ 0.16
Matn4O89029 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn4O89029 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn4O89029 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Matn4O89029 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn4O89029 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn4O89029 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn4O89029 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn4O89029 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Matn4O89029 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn4O89029 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Matn4O89029 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn4O89029 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn4O89029 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Matn4O89029 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Matn4O89029 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Matn4O89029 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Matn4O89029 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Matn4O89029 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Matn4O89029 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Matn4O89029 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Matn4O89029 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Matn4O89029 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Matn4O89029 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Matn4O89029 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.02■□□□□ 0.16
Matn4O89029 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.02■□□□□ 0.16
Matn4O89029 Gm17661-201ENSMUST00000170317 270 ntBASIC16.02■□□□□ 0.16
Matn4O89029 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Matn4O89029 Gm10517-202ENSMUST00000192970 758 ntBASIC16.02■□□□□ 0.16
Matn4O89029 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Matn4O89029 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Matn4O89029 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.02■□□□□ 0.16
Matn4O89029 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
Matn4O89029 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Matn4O89029 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Matn4O89029 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.02■□□□□ 0.15
Matn4O89029 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Matn4O89029 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.02■□□□□ 0.15
Matn4O89029 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
Matn4O89029 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Matn4O89029 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Matn4O89029 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Matn4O89029 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Matn4O89029 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Matn4O89029 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Matn4O89029 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.01■□□□□ 0.15
Matn4O89029 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Matn4O89029 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Matn4O89029 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Matn4O89029 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Matn4O89029 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Matn4O89029 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Matn4O89029 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Matn4O89029 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.01■□□□□ 0.15
Matn4O89029 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Matn4O89029 Gm12382-201ENSMUST00000122005 922 ntBASIC16.01■□□□□ 0.15
Matn4O89029 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Matn4O89029 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.01■□□□□ 0.15
Matn4O89029 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.01■□□□□ 0.15
Matn4O89029 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Matn4O89029 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Matn4O89029 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Matn4O89029 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Matn4O89029 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Matn4O89029 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.01■□□□□ 0.15
Matn4O89029 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Matn4O89029 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Matn4O89029 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Matn4O89029 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Matn4O89029 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Matn4O89029 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Matn4O89029 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Matn4O89029 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.01■□□□□ 0.15
Matn4O89029 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.01■□□□□ 0.15
Matn4O89029 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Matn4O89029 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.01■□□□□ 0.15
Matn4O89029 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16■□□□□ 0.15
Matn4O89029 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Matn4O89029 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Matn4O89029 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Matn4O89029 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Matn4O89029 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Matn4O89029 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Matn4O89029 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Matn4O89029 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Matn4O89029 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16■□□□□ 0.15
Matn4O89029 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16■□□□□ 0.15
Matn4O89029 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16■□□□□ 0.15
Matn4O89029 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms