Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Best1O88870 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Best1O88870 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Best1O88870 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Best1O88870 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Best1O88870 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Best1O88870 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.32■□□□□ 0.2
Best1O88870 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Best1O88870 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.31■□□□□ 0.2
Best1O88870 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Best1O88870 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Best1O88870 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Best1O88870 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Best1O88870 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Best1O88870 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Best1O88870 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Best1O88870 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Best1O88870 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Best1O88870 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.31■□□□□ 0.2
Best1O88870 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Best1O88870 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.3■□□□□ 0.2
Best1O88870 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Best1O88870 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Best1O88870 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.3■□□□□ 0.2
Best1O88870 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Best1O88870 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Best1O88870 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Best1O88870 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Best1O88870 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Best1O88870 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Best1O88870 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Best1O88870 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.3■□□□□ 0.2
Best1O88870 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Best1O88870 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Best1O88870 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Best1O88870 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Best1O88870 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Best1O88870 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.3■□□□□ 0.2
Best1O88870 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Best1O88870 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.3■□□□□ 0.2
Best1O88870 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Best1O88870 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Best1O88870 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Best1O88870 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Best1O88870 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Best1O88870 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Best1O88870 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Best1O88870 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Best1O88870 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Best1O88870 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Best1O88870 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Best1O88870 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Best1O88870 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.29■□□□□ 0.2
Best1O88870 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Best1O88870 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Best1O88870 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Best1O88870 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Best1O88870 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Best1O88870 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.29■□□□□ 0.2
Best1O88870 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Best1O88870 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Best1O88870 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Best1O88870 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Best1O88870 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Best1O88870 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Best1O88870 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.29■□□□□ 0.2
Best1O88870 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Best1O88870 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Best1O88870 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Best1O88870 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Best1O88870 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.28■□□□□ 0.2
Best1O88870 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Best1O88870 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Best1O88870 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Best1O88870 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Best1O88870 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Best1O88870 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Best1O88870 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Best1O88870 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.28■□□□□ 0.2
Best1O88870 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Best1O88870 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.28■□□□□ 0.2
Best1O88870 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Best1O88870 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Best1O88870 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Best1O88870 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Best1O88870 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.28■□□□□ 0.2
Best1O88870 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.28■□□□□ 0.2
Best1O88870 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.28■□□□□ 0.2
Best1O88870 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Best1O88870 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Best1O88870 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Best1O88870 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Best1O88870 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Best1O88870 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Best1O88870 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Best1O88870 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Best1O88870 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.27■□□□□ 0.2
Best1O88870 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Best1O88870 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.27■□□□□ 0.2
Best1O88870 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms