Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcn1O88704 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcn1O88704 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcn1O88704 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcn1O88704 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcn1O88704 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hcn1O88704 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hcn1O88704 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hcn1O88704 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hcn1O88704 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hcn1O88704 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hcn1O88704 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hcn1O88704 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.24■□□□□ 0.19
Hcn1O88704 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hcn1O88704 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Hcn1O88704 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hcn1O88704 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hcn1O88704 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Hcn1O88704 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hcn1O88704 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hcn1O88704 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.24■□□□□ 0.19
Hcn1O88704 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hcn1O88704 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hcn1O88704 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hcn1O88704 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hcn1O88704 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hcn1O88704 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hcn1O88704 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hcn1O88704 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Hcn1O88704 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.23■□□□□ 0.19
Hcn1O88704 Mir5122-201ENSMUST00000175004 89 ntBASIC16.23■□□□□ 0.19
Hcn1O88704 Mir6982-201ENSMUST00000184354 68 ntBASIC16.23■□□□□ 0.19
Hcn1O88704 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.23■□□□□ 0.19
Hcn1O88704 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Hcn1O88704 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hcn1O88704 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.23■□□□□ 0.19
Hcn1O88704 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.23■□□□□ 0.19
Hcn1O88704 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hcn1O88704 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hcn1O88704 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hcn1O88704 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hcn1O88704 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hcn1O88704 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hcn1O88704 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hcn1O88704 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hcn1O88704 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hcn1O88704 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.22■□□□□ 0.19
Hcn1O88704 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hcn1O88704 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hcn1O88704 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hcn1O88704 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Hcn1O88704 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Hcn1O88704 Gm13401-201ENSMUST00000117074 291 ntBASIC16.22■□□□□ 0.19
Hcn1O88704 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Hcn1O88704 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hcn1O88704 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.22■□□□□ 0.19
Hcn1O88704 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hcn1O88704 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hcn1O88704 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.22■□□□□ 0.19
Hcn1O88704 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.22■□□□□ 0.19
Hcn1O88704 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.22■□□□□ 0.19
Hcn1O88704 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hcn1O88704 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Hcn1O88704 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hcn1O88704 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hcn1O88704 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hcn1O88704 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hcn1O88704 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hcn1O88704 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hcn1O88704 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hcn1O88704 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hcn1O88704 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn1O88704 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn1O88704 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Hcn1O88704 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn1O88704 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn1O88704 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn1O88704 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn1O88704 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.21■□□□□ 0.19
Hcn1O88704 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn1O88704 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.21■□□□□ 0.19
Hcn1O88704 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.21■□□□□ 0.19
Hcn1O88704 Gm37055-201ENSMUST00000191866 133 ntBASIC16.21■□□□□ 0.19
Hcn1O88704 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.21■□□□□ 0.19
Hcn1O88704 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn1O88704 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.21■□□□□ 0.19
Hcn1O88704 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn1O88704 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hcn1O88704 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Hcn1O88704 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hcn1O88704 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hcn1O88704 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hcn1O88704 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn1O88704 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn1O88704 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn1O88704 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn1O88704 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn1O88704 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
Hcn1O88704 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hcn1O88704 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms