Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Tulp3O88413 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tulp3O88413 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.85■□□□□ 0.13
Tulp3O88413 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Tulp3O88413 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tulp3O88413 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tulp3O88413 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tulp3O88413 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tulp3O88413 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Tulp3O88413 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.85■□□□□ 0.13
Tulp3O88413 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Tulp3O88413 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tulp3O88413 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tulp3O88413 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tulp3O88413 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Tulp3O88413 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tulp3O88413 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tulp3O88413 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tulp3O88413 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Tulp3O88413 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tulp3O88413 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tulp3O88413 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tulp3O88413 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Tulp3O88413 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tulp3O88413 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tulp3O88413 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tulp3O88413 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tulp3O88413 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Tulp3O88413 Gm6576-201ENSMUST00000169678 883 ntBASIC15.84■□□□□ 0.13
Tulp3O88413 Gm10138-203ENSMUST00000206952 366 ntBASIC15.84■□□□□ 0.13
Tulp3O88413 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tulp3O88413 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tulp3O88413 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tulp3O88413 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tulp3O88413 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tulp3O88413 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Tulp3O88413 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tulp3O88413 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tulp3O88413 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tulp3O88413 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.84■□□□□ 0.13
Tulp3O88413 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tulp3O88413 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tulp3O88413 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tulp3O88413 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tulp3O88413 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.84■□□□□ 0.13
Tulp3O88413 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Tulp3O88413 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tulp3O88413 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tulp3O88413 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tulp3O88413 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Tulp3O88413 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tulp3O88413 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tulp3O88413 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tulp3O88413 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Tulp3O88413 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tulp3O88413 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Tulp3O88413 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tulp3O88413 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tulp3O88413 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.83■□□□□ 0.12
Tulp3O88413 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tulp3O88413 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tulp3O88413 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Tulp3O88413 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Tulp3O88413 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tulp3O88413 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Tulp3O88413 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tulp3O88413 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tulp3O88413 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.83■□□□□ 0.12
Tulp3O88413 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tulp3O88413 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tulp3O88413 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.83■□□□□ 0.12
Tulp3O88413 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Tulp3O88413 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tulp3O88413 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tulp3O88413 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tulp3O88413 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tulp3O88413 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tulp3O88413 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Tulp3O88413 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tulp3O88413 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Tulp3O88413 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.82■□□□□ 0.12
Tulp3O88413 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Tulp3O88413 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tulp3O88413 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Tulp3O88413 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.82■□□□□ 0.12
Tulp3O88413 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.82■□□□□ 0.12
Tulp3O88413 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tulp3O88413 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Tulp3O88413 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Tulp3O88413 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.82■□□□□ 0.12
Tulp3O88413 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.82■□□□□ 0.12
Tulp3O88413 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tulp3O88413 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tulp3O88413 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tulp3O88413 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tulp3O88413 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tulp3O88413 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Tulp3O88413 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tulp3O88413 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tulp3O88413 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms