Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rpl35aO55142 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl35aO55142 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl35aO55142 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl35aO55142 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rpl35aO55142 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl35aO55142 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
Rpl35aO55142 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl35aO55142 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl35aO55142 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl35aO55142 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl35aO55142 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl35aO55142 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl35aO55142 Gm13559-201ENSMUST00000120476 863 ntBASIC12.65□□□□□ -0.38
Rpl35aO55142 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.65□□□□□ -0.38
Rpl35aO55142 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rpl35aO55142 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl35aO55142 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl35aO55142 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl35aO55142 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rpl35aO55142 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rpl35aO55142 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl35aO55142 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl35aO55142 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl35aO55142 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl35aO55142 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl35aO55142 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl35aO55142 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Rpl35aO55142 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl35aO55142 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl35aO55142 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rpl35aO55142 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rpl35aO55142 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl35aO55142 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl35aO55142 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.64□□□□□ -0.39
Rpl35aO55142 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl35aO55142 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.64□□□□□ -0.39
Rpl35aO55142 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl35aO55142 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl35aO55142 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC12.64□□□□□ -0.39
Rpl35aO55142 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl35aO55142 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl35aO55142 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl35aO55142 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl35aO55142 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl35aO55142 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl35aO55142 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl35aO55142 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl35aO55142 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rpl35aO55142 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl35aO55142 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.64□□□□□ -0.39
Rpl35aO55142 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.64□□□□□ -0.39
Rpl35aO55142 Gm37025-201ENSMUST00000195159 829 ntBASIC12.64□□□□□ -0.39
Rpl35aO55142 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rpl35aO55142 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl35aO55142 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rpl35aO55142 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl35aO55142 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl35aO55142 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl35aO55142 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl35aO55142 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl35aO55142 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rpl35aO55142 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl35aO55142 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl35aO55142 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl35aO55142 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl35aO55142 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl35aO55142 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl35aO55142 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl35aO55142 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl35aO55142 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl35aO55142 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl35aO55142 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl35aO55142 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl35aO55142 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.63□□□□□ -0.39
Rpl35aO55142 Mir8112-201ENSMUST00000184382 131 ntBASIC12.63□□□□□ -0.39
Rpl35aO55142 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl35aO55142 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl35aO55142 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl35aO55142 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl35aO55142 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl35aO55142 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl35aO55142 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.63□□□□□ -0.39
Rpl35aO55142 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.63□□□□□ -0.39
Rpl35aO55142 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rpl35aO55142 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl35aO55142 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl35aO55142 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl35aO55142 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl35aO55142 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl35aO55142 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rpl35aO55142 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl35aO55142 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl35aO55142 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Rpl35aO55142 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl35aO55142 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl35aO55142 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.62□□□□□ -0.39
Rpl35aO55142 Gm2274-201ENSMUST00000184539 609 ntBASIC12.62□□□□□ -0.39
Rpl35aO55142 Gm7791-201ENSMUST00000219066 539 ntBASIC12.62□□□□□ -0.39
Rpl35aO55142 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms