Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn5O54942 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cldn5O54942 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn5O54942 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn5O54942 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn5O54942 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn5O54942 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn5O54942 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn5O54942 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn5O54942 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn5O54942 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn5O54942 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn5O54942 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Cldn5O54942 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn5O54942 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn5O54942 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn5O54942 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn5O54942 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn5O54942 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.61■□□□□ 0.41
Cldn5O54942 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn5O54942 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn5O54942 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn5O54942 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn5O54942 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cldn5O54942 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cldn5O54942 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cldn5O54942 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn5O54942 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn5O54942 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn5O54942 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn5O54942 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.6■□□□□ 0.41
Cldn5O54942 Gm25016-201ENSMUST00000158399 131 ntBASIC17.6■□□□□ 0.41
Cldn5O54942 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cldn5O54942 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cldn5O54942 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cldn5O54942 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn5O54942 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn5O54942 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn5O54942 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cldn5O54942 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn5O54942 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn5O54942 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cldn5O54942 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn5O54942 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn5O54942 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.6■□□□□ 0.41
Cldn5O54942 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn5O54942 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn5O54942 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn5O54942 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn5O54942 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn5O54942 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn5O54942 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn5O54942 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Cldn5O54942 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cldn5O54942 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn5O54942 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn5O54942 Gm9013-201ENSMUST00000132939 882 ntBASIC17.59■□□□□ 0.41
Cldn5O54942 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn5O54942 Gm37722-201ENSMUST00000193757 208 ntBASIC17.59■□□□□ 0.41
Cldn5O54942 Gm33142-201ENSMUST00000193913 867 ntBASIC17.59■□□□□ 0.41
Cldn5O54942 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn5O54942 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.59■□□□□ 0.41
Cldn5O54942 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn5O54942 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn5O54942 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn5O54942 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn5O54942 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.58■□□□□ 0.41
Cldn5O54942 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cldn5O54942 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cldn5O54942 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.58■□□□□ 0.41
Cldn5O54942 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Cldn5O54942 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cldn5O54942 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.58■□□□□ 0.41
Cldn5O54942 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cldn5O54942 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cldn5O54942 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cldn5O54942 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cldn5O54942 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cldn5O54942 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Cldn5O54942 Gm13186-201ENSMUST00000118031 316 ntBASIC17.58■□□□□ 0.4
Cldn5O54942 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.58■□□□□ 0.4
Cldn5O54942 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.58■□□□□ 0.4
Cldn5O54942 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.58■□□□□ 0.4
Cldn5O54942 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn5O54942 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cldn5O54942 Phf7-203ENSMUST00000226565 1971 ntBASIC17.58■□□□□ 0.4
Cldn5O54942 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cldn5O54942 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn5O54942 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn5O54942 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn5O54942 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn5O54942 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn5O54942 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn5O54942 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn5O54942 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn5O54942 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn5O54942 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.57■□□□□ 0.4
Cldn5O54942 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn5O54942 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn5O54942 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms