Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr6O54689 Gm13234-201ENSMUST00000120010 747 ntBASIC14.28□□□□□ -0.12
Ccr6O54689 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr6O54689 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr6O54689 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.28□□□□□ -0.12
Ccr6O54689 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr6O54689 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr6O54689 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr6O54689 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr6O54689 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr6O54689 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccr6O54689 Gm21956-201ENSMUST00000179946 522 ntBASIC14.28□□□□□ -0.12
Ccr6O54689 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.28□□□□□ -0.12
Ccr6O54689 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr6O54689 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.28□□□□□ -0.12
Ccr6O54689 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr6O54689 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccr6O54689 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr6O54689 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr6O54689 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr6O54689 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr6O54689 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccr6O54689 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccr6O54689 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccr6O54689 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccr6O54689 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ccr6O54689 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccr6O54689 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccr6O54689 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.27□□□□□ -0.12
Ccr6O54689 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccr6O54689 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccr6O54689 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccr6O54689 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccr6O54689 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccr6O54689 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ccr6O54689 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ccr6O54689 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccr6O54689 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccr6O54689 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.27□□□□□ -0.12
Ccr6O54689 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccr6O54689 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ccr6O54689 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccr6O54689 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccr6O54689 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccr6O54689 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccr6O54689 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccr6O54689 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccr6O54689 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccr6O54689 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Ccr6O54689 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ccr6O54689 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccr6O54689 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccr6O54689 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ccr6O54689 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccr6O54689 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccr6O54689 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccr6O54689 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccr6O54689 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccr6O54689 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccr6O54689 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
Ccr6O54689 Gm6420-201ENSMUST00000193885 723 ntBASIC14.26□□□□□ -0.13
Ccr6O54689 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccr6O54689 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ccr6O54689 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccr6O54689 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccr6O54689 Zfp783-201ENSMUST00000095946 670 ntBASIC14.26□□□□□ -0.13
Ccr6O54689 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccr6O54689 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccr6O54689 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccr6O54689 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccr6O54689 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccr6O54689 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccr6O54689 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr6O54689 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr6O54689 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Ccr6O54689 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccr6O54689 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr6O54689 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr6O54689 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr6O54689 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr6O54689 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr6O54689 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccr6O54689 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr6O54689 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr6O54689 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr6O54689 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.25□□□□□ -0.13
Ccr6O54689 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr6O54689 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr6O54689 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr6O54689 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr6O54689 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Ccr6O54689 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr6O54689 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr6O54689 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr6O54689 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr6O54689 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr6O54689 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ccr6O54689 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccr6O54689 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccr6O54689 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms