Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Npc1O35604 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Npc1O35604 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.56■□□□□ 0.24
Npc1O35604 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npc1O35604 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Npc1O35604 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npc1O35604 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npc1O35604 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npc1O35604 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Npc1O35604 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.56■□□□□ 0.24
Npc1O35604 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npc1O35604 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.56■□□□□ 0.24
Npc1O35604 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npc1O35604 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npc1O35604 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npc1O35604 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npc1O35604 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npc1O35604 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Npc1O35604 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npc1O35604 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npc1O35604 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npc1O35604 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npc1O35604 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npc1O35604 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Npc1O35604 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Npc1O35604 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Npc1O35604 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Npc1O35604 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Npc1O35604 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Npc1O35604 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Npc1O35604 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Npc1O35604 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.55■□□□□ 0.24
Npc1O35604 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Npc1O35604 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.55■□□□□ 0.24
Npc1O35604 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Npc1O35604 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Npc1O35604 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Npc1O35604 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Npc1O35604 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Npc1O35604 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Npc1O35604 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Npc1O35604 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Npc1O35604 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Npc1O35604 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Npc1O35604 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Npc1O35604 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Npc1O35604 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Npc1O35604 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Npc1O35604 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Npc1O35604 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Npc1O35604 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Npc1O35604 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Npc1O35604 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.54■□□□□ 0.24
Npc1O35604 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Npc1O35604 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Npc1O35604 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Npc1O35604 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Npc1O35604 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Npc1O35604 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Npc1O35604 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Npc1O35604 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Npc1O35604 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.54■□□□□ 0.24
Npc1O35604 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Npc1O35604 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
Npc1O35604 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.53■□□□□ 0.24
Npc1O35604 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npc1O35604 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npc1O35604 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Npc1O35604 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Npc1O35604 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npc1O35604 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Npc1O35604 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.53■□□□□ 0.24
Npc1O35604 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Npc1O35604 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.53■□□□□ 0.24
Npc1O35604 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.53■□□□□ 0.24
Npc1O35604 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.53■□□□□ 0.24
Npc1O35604 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npc1O35604 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.53■□□□□ 0.24
Npc1O35604 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npc1O35604 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npc1O35604 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Npc1O35604 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Npc1O35604 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.52■□□□□ 0.24
Npc1O35604 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Npc1O35604 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Npc1O35604 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Npc1O35604 Gm10013-201ENSMUST00000106074 672 ntBASIC16.52■□□□□ 0.24
Npc1O35604 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Npc1O35604 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Npc1O35604 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.52■□□□□ 0.23
Npc1O35604 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.52■□□□□ 0.23
Npc1O35604 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.52■□□□□ 0.23
Npc1O35604 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Npc1O35604 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Npc1O35604 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Npc1O35604 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Npc1O35604 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.51■□□□□ 0.23
Npc1O35604 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Npc1O35604 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.51■□□□□ 0.23
Npc1O35604 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms