Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Abca4O35600 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Abca4O35600 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.92■□□□□ 0.14
Abca4O35600 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.92■□□□□ 0.14
Abca4O35600 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Abca4O35600 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Abca4O35600 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Abca4O35600 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Abca4O35600 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.92■□□□□ 0.14
Abca4O35600 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Abca4O35600 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Abca4O35600 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Abca4O35600 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Abca4O35600 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.91■□□□□ 0.14
Abca4O35600 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Abca4O35600 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Abca4O35600 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Abca4O35600 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Abca4O35600 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Abca4O35600 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Abca4O35600 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Abca4O35600 Gm27494-201ENSMUST00000184735 189 ntBASIC15.91■□□□□ 0.14
Abca4O35600 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Abca4O35600 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Abca4O35600 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Abca4O35600 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Abca4O35600 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Abca4O35600 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Abca4O35600 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Abca4O35600 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Abca4O35600 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Abca4O35600 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Abca4O35600 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Abca4O35600 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Abca4O35600 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Abca4O35600 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Abca4O35600 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Abca4O35600 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Abca4O35600 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Abca4O35600 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Abca4O35600 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.9■□□□□ 0.14
Abca4O35600 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.9■□□□□ 0.14
Abca4O35600 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Abca4O35600 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Abca4O35600 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Abca4O35600 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.9■□□□□ 0.14
Abca4O35600 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Abca4O35600 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Abca4O35600 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Abca4O35600 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Abca4O35600 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Abca4O35600 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Abca4O35600 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Abca4O35600 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Abca4O35600 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Abca4O35600 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.9■□□□□ 0.14
Abca4O35600 Golph3-202ENSMUST00000226517 2359 ntBASIC15.89■□□□□ 0.14
Abca4O35600 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Abca4O35600 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abca4O35600 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Abca4O35600 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abca4O35600 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.89■□□□□ 0.13
Abca4O35600 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.89■□□□□ 0.13
Abca4O35600 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abca4O35600 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abca4O35600 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Abca4O35600 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Abca4O35600 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abca4O35600 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abca4O35600 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abca4O35600 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Abca4O35600 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abca4O35600 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.89■□□□□ 0.13
Abca4O35600 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.89■□□□□ 0.13
Abca4O35600 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.89■□□□□ 0.13
Abca4O35600 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Abca4O35600 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Abca4O35600 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.88■□□□□ 0.13
Abca4O35600 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Abca4O35600 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Abca4O35600 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Abca4O35600 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Abca4O35600 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.88■□□□□ 0.13
Abca4O35600 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Abca4O35600 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.88■□□□□ 0.13
Abca4O35600 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Abca4O35600 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.88■□□□□ 0.13
Abca4O35600 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Abca4O35600 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Abca4O35600 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Abca4O35600 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Abca4O35600 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.88■□□□□ 0.13
Abca4O35600 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Abca4O35600 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Abca4O35600 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Abca4O35600 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Abca4O35600 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.88■□□□□ 0.13
Abca4O35600 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Abca4O35600 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Abca4O35600 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms