Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.28■□□□□ 0.2
Clk4O35493 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk4O35493 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk4O35493 Gm12085-201ENSMUST00000119263 940 ntBASIC16.28■□□□□ 0.2
Clk4O35493 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.28■□□□□ 0.2
Clk4O35493 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clk4O35493 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk4O35493 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk4O35493 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk4O35493 Gm27463-201ENSMUST00000183569 57 ntBASIC16.28■□□□□ 0.2
Clk4O35493 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.28■□□□□ 0.2
Clk4O35493 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.28■□□□□ 0.2
Clk4O35493 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.28■□□□□ 0.2
Clk4O35493 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.28■□□□□ 0.2
Clk4O35493 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk4O35493 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk4O35493 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk4O35493 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk4O35493 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk4O35493 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk4O35493 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Clk4O35493 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.28■□□□□ 0.2
Clk4O35493 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk4O35493 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk4O35493 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clk4O35493 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clk4O35493 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Clk4O35493 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clk4O35493 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clk4O35493 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.27■□□□□ 0.2
Clk4O35493 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.27■□□□□ 0.2
Clk4O35493 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Clk4O35493 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clk4O35493 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clk4O35493 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.27■□□□□ 0.2
Clk4O35493 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Clk4O35493 Gm5417-201ENSMUST00000079706 384 ntBASIC16.27■□□□□ 0.2
Clk4O35493 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.27■□□□□ 0.2
Clk4O35493 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Clk4O35493 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clk4O35493 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.27■□□□□ 0.19
Clk4O35493 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
Clk4O35493 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clk4O35493 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Clk4O35493 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk4O35493 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.26■□□□□ 0.19
Clk4O35493 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clk4O35493 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk4O35493 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk4O35493 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk4O35493 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clk4O35493 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk4O35493 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk4O35493 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Clk4O35493 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clk4O35493 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk4O35493 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Clk4O35493 Gm17661-201ENSMUST00000170317 270 ntBASIC16.26■□□□□ 0.19
Clk4O35493 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.26■□□□□ 0.19
Clk4O35493 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.26■□□□□ 0.19
Clk4O35493 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk4O35493 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk4O35493 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clk4O35493 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk4O35493 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk4O35493 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk4O35493 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clk4O35493 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk4O35493 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.26■□□□□ 0.19
Clk4O35493 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk4O35493 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk4O35493 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk4O35493 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clk4O35493 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk4O35493 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk4O35493 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Clk4O35493 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clk4O35493 Il3ra-202ENSMUST00000223589 738 ntBASIC16.25■□□□□ 0.19
Clk4O35493 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk4O35493 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk4O35493 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clk4O35493 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk4O35493 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Clk4O35493 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.25■□□□□ 0.19
Clk4O35493 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Clk4O35493 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clk4O35493 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clk4O35493 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clk4O35493 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clk4O35493 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clk4O35493 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Clk4O35493 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clk4O35493 Mir6982-201ENSMUST00000184354 68 ntBASIC16.24■□□□□ 0.19
Clk4O35493 Gm9731-201ENSMUST00000209480 747 ntBASIC16.24■□□□□ 0.19
Clk4O35493 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Clk4O35493 Gm30025-201ENSMUST00000218555 728 ntBASIC16.24■□□□□ 0.19
Clk4O35493 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Clk4O35493 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clk4O35493 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clk4O35493 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms