Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.15■□□□□ 0.18
Clk3O35492 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Clk3O35492 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clk3O35492 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clk3O35492 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clk3O35492 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Clk3O35492 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.15■□□□□ 0.18
Clk3O35492 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.15■□□□□ 0.18
Clk3O35492 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clk3O35492 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
Clk3O35492 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clk3O35492 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clk3O35492 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clk3O35492 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clk3O35492 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Clk3O35492 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Clk3O35492 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clk3O35492 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clk3O35492 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clk3O35492 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.14■□□□□ 0.17
Clk3O35492 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.14■□□□□ 0.17
Clk3O35492 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clk3O35492 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clk3O35492 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clk3O35492 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Clk3O35492 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Clk3O35492 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clk3O35492 Gm22240-201ENSMUST00000175225 82 ntBASIC16.14■□□□□ 0.17
Clk3O35492 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clk3O35492 Gm18025-201ENSMUST00000221733 862 ntBASIC16.14■□□□□ 0.17
Clk3O35492 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clk3O35492 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.14■□□□□ 0.17
Clk3O35492 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.14■□□□□ 0.17
Clk3O35492 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clk3O35492 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clk3O35492 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Clk3O35492 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clk3O35492 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clk3O35492 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clk3O35492 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clk3O35492 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clk3O35492 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clk3O35492 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clk3O35492 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clk3O35492 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clk3O35492 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Clk3O35492 Gm12382-201ENSMUST00000122005 922 ntBASIC16.13■□□□□ 0.17
Clk3O35492 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clk3O35492 Gm27011-201ENSMUST00000182352 972 ntBASIC16.13■□□□□ 0.17
Clk3O35492 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.13■□□□□ 0.17
Clk3O35492 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clk3O35492 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clk3O35492 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clk3O35492 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clk3O35492 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clk3O35492 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clk3O35492 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clk3O35492 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.13■□□□□ 0.17
Clk3O35492 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clk3O35492 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clk3O35492 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clk3O35492 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clk3O35492 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clk3O35492 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clk3O35492 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clk3O35492 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.12■□□□□ 0.17
Clk3O35492 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clk3O35492 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clk3O35492 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Clk3O35492 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clk3O35492 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clk3O35492 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Clk3O35492 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Clk3O35492 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.12■□□□□ 0.17
Clk3O35492 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clk3O35492 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clk3O35492 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clk3O35492 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clk3O35492 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Clk3O35492 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clk3O35492 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clk3O35492 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Clk3O35492 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clk3O35492 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clk3O35492 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clk3O35492 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clk3O35492 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Clk3O35492 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clk3O35492 Gm42545-201ENSMUST00000202755 922 ntBASIC16.11■□□□□ 0.17
Clk3O35492 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clk3O35492 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Clk3O35492 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clk3O35492 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clk3O35492 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Clk3O35492 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Clk3O35492 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clk3O35492 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clk3O35492 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clk3O35492 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Clk3O35492 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms