Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Tnfsf11O35235 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf11O35235 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf11O35235 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf11O35235 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Tnfsf11O35235 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf11O35235 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.27□□□□□ -0.28
Tnfsf11O35235 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf11O35235 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf11O35235 Gm42778-201ENSMUST00000199644 553 ntBASIC13.27□□□□□ -0.29
Tnfsf11O35235 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf11O35235 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf11O35235 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Tnfsf11O35235 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf11O35235 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf11O35235 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf11O35235 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf11O35235 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf11O35235 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf11O35235 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf11O35235 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Tnfsf11O35235 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf11O35235 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf11O35235 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf11O35235 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Tnfsf11O35235 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf11O35235 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf11O35235 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf11O35235 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf11O35235 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf11O35235 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf11O35235 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf11O35235 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.26□□□□□ -0.29
Tnfsf11O35235 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Tnfsf11O35235 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf11O35235 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf11O35235 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf11O35235 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf11O35235 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf11O35235 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf11O35235 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Tnfsf11O35235 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf11O35235 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf11O35235 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Tnfsf11O35235 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf11O35235 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf11O35235 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf11O35235 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf11O35235 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf11O35235 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf11O35235 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf11O35235 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf11O35235 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf11O35235 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf11O35235 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf11O35235 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf11O35235 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf11O35235 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.25□□□□□ -0.29
Tnfsf11O35235 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.25□□□□□ -0.29
Tnfsf11O35235 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf11O35235 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf11O35235 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf11O35235 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Tnfsf11O35235 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Tnfsf11O35235 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC13.25□□□□□ -0.29
Tnfsf11O35235 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf11O35235 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf11O35235 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf11O35235 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf11O35235 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Tnfsf11O35235 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf11O35235 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf11O35235 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf11O35235 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf11O35235 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf11O35235 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf11O35235 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf11O35235 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.25□□□□□ -0.29
Tnfsf11O35235 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf11O35235 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf11O35235 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf11O35235 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf11O35235 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.24□□□□□ -0.29
Tnfsf11O35235 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Tnfsf11O35235 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf11O35235 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf11O35235 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf11O35235 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf11O35235 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.24□□□□□ -0.29
Tnfsf11O35235 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.24□□□□□ -0.29
Tnfsf11O35235 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf11O35235 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.24□□□□□ -0.29
Tnfsf11O35235 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Tnfsf11O35235 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf11O35235 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf11O35235 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf11O35235 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf11O35235 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Tnfsf11O35235 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf11O35235 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms