Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac1O09106 Gm12382-201ENSMUST00000122005 922 ntBASIC20.22■□□□□ 0.83
Hdac1O09106 Gm27275-201ENSMUST00000184318 272 ntBASIC20.22■□□□□ 0.83
Hdac1O09106 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac1O09106 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac1O09106 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac1O09106 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac1O09106 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Hdac1O09106 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac1O09106 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac1O09106 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac1O09106 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac1O09106 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac1O09106 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac1O09106 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac1O09106 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac1O09106 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac1O09106 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac1O09106 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac1O09106 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac1O09106 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Hdac1O09106 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac1O09106 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac1O09106 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Hdac1O09106 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac1O09106 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac1O09106 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Hdac1O09106 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac1O09106 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac1O09106 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac1O09106 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac1O09106 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Hdac1O09106 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac1O09106 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac1O09106 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC20.2■□□□□ 0.82
Hdac1O09106 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac1O09106 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac1O09106 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac1O09106 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.2■□□□□ 0.82
Hdac1O09106 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac1O09106 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac1O09106 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Hdac1O09106 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac1O09106 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac1O09106 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Hdac1O09106 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac1O09106 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac1O09106 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac1O09106 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac1O09106 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac1O09106 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac1O09106 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac1O09106 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac1O09106 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac1O09106 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Hdac1O09106 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Hdac1O09106 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.19■□□□□ 0.82
Hdac1O09106 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac1O09106 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac1O09106 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac1O09106 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac1O09106 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac1O09106 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac1O09106 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac1O09106 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac1O09106 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac1O09106 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac1O09106 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac1O09106 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac1O09106 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac1O09106 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac1O09106 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Hdac1O09106 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac1O09106 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac1O09106 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac1O09106 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Hdac1O09106 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac1O09106 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac1O09106 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac1O09106 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac1O09106 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac1O09106 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.17■□□□□ 0.82
Hdac1O09106 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.17■□□□□ 0.82
Hdac1O09106 Gm37025-201ENSMUST00000195159 829 ntBASIC20.17■□□□□ 0.82
Hdac1O09106 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac1O09106 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac1O09106 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac1O09106 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac1O09106 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
Hdac1O09106 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Hdac1O09106 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Hdac1O09106 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.17■□□□□ 0.82
Hdac1O09106 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac1O09106 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac1O09106 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac1O09106 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac1O09106 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac1O09106 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC20.16■□□□□ 0.82
Hdac1O09106 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac1O09106 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms