Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Ccdc180J3QNE4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
Ccdc180J3QNE4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC30.82■■■□□ 2.52
Ccdc180J3QNE4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
Ccdc180J3QNE4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
Ccdc180J3QNE4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Ccdc180J3QNE4 Gm27525-201ENSMUST00000184465 107 ntBASIC30.82■■■□□ 2.52
Ccdc180J3QNE4 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC30.82■■■□□ 2.52
Ccdc180J3QNE4 Gm18195-201ENSMUST00000207604 706 ntBASIC30.82■■■□□ 2.52
Ccdc180J3QNE4 AC138767.1-201ENSMUST00000222661 415 ntBASIC30.82■■■□□ 2.52
Ccdc180J3QNE4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC30.82■■■□□ 2.52
Ccdc180J3QNE4 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Ccdc180J3QNE4 Fcho2-208ENSMUST00000224992 2964 ntBASIC30.82■■■□□ 2.52
Ccdc180J3QNE4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
Ccdc180J3QNE4 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC30.81■■■□□ 2.52
Ccdc180J3QNE4 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Ccdc180J3QNE4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Ccdc180J3QNE4 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Ccdc180J3QNE4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC30.81■■■□□ 2.52
Ccdc180J3QNE4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Ccdc180J3QNE4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Ccdc180J3QNE4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
Ccdc180J3QNE4 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Ccdc180J3QNE4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Ccdc180J3QNE4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Ccdc180J3QNE4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
Ccdc180J3QNE4 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Ccdc180J3QNE4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Ccdc180J3QNE4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Ccdc180J3QNE4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Ccdc180J3QNE4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Ccdc180J3QNE4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Ccdc180J3QNE4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Ccdc180J3QNE4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
Ccdc180J3QNE4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
Ccdc180J3QNE4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Ccdc180J3QNE4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC30.79■■■□□ 2.52
Ccdc180J3QNE4 Gm27867-201ENSMUST00000184778 125 ntBASIC30.79■■■□□ 2.52
Ccdc180J3QNE4 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
Ccdc180J3QNE4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC30.79■■■□□ 2.52
Ccdc180J3QNE4 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC30.79■■■□□ 2.52
Ccdc180J3QNE4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
Ccdc180J3QNE4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Ccdc180J3QNE4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC30.79■■■□□ 2.52
Ccdc180J3QNE4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Ccdc180J3QNE4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC30.78■■■□□ 2.52
Ccdc180J3QNE4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Ccdc180J3QNE4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC30.78■■■□□ 2.52
Ccdc180J3QNE4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Ccdc180J3QNE4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Ccdc180J3QNE4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC30.78■■■□□ 2.52
Ccdc180J3QNE4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Ccdc180J3QNE4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Ccdc180J3QNE4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Ccdc180J3QNE4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC30.78■■■□□ 2.52
Ccdc180J3QNE4 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
Ccdc180J3QNE4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC30.78■■■□□ 2.52
Ccdc180J3QNE4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC30.78■■■□□ 2.52
Ccdc180J3QNE4 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Ccdc180J3QNE4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC30.77■■■□□ 2.52
Ccdc180J3QNE4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
Ccdc180J3QNE4 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ccdc180J3QNE4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
Ccdc180J3QNE4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ccdc180J3QNE4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ccdc180J3QNE4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ccdc180J3QNE4 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ccdc180J3QNE4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC30.77■■■□□ 2.52
Ccdc180J3QNE4 Gm43073-201ENSMUST00000198200 1189 ntBASIC30.77■■■□□ 2.52
Ccdc180J3QNE4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ccdc180J3QNE4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Ccdc180J3QNE4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ccdc180J3QNE4 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ccdc180J3QNE4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ccdc180J3QNE4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Ccdc180J3QNE4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC30.76■■■□□ 2.51
Ccdc180J3QNE4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Ccdc180J3QNE4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.51
Ccdc180J3QNE4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC30.76■■■□□ 2.51
Ccdc180J3QNE4 Vti1a-206ENSMUST00000225529 1244 ntBASIC30.76■■■□□ 2.51
Ccdc180J3QNE4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Ccdc180J3QNE4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Ccdc180J3QNE4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.51
Ccdc180J3QNE4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Ccdc180J3QNE4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
Ccdc180J3QNE4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
Ccdc180J3QNE4 Gm37811-201ENSMUST00000192416 2601 ntBASIC30.75■■■□□ 2.51
Ccdc180J3QNE4 Gm1818-201ENSMUST00000169406 1184 ntBASIC30.75■■■□□ 2.51
Ccdc180J3QNE4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Ccdc180J3QNE4 Gm18206-201ENSMUST00000207027 926 ntBASIC30.75■■■□□ 2.51
Ccdc180J3QNE4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
Ccdc180J3QNE4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Ccdc180J3QNE4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Ccdc180J3QNE4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC30.75■■■□□ 2.51
Ccdc180J3QNE4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Ccdc180J3QNE4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Ccdc180J3QNE4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Ccdc180J3QNE4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC30.74■■■□□ 2.51
Ccdc180J3QNE4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
Ccdc180J3QNE4 Gm11452-201ENSMUST00000122376 690 ntBASIC30.74■■■□□ 2.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms