Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim55G3X8Y1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trim55G3X8Y1 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim55G3X8Y1 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim55G3X8Y1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim55G3X8Y1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim55G3X8Y1 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.49■□□□□ 0.39
Trim55G3X8Y1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim55G3X8Y1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim55G3X8Y1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim55G3X8Y1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim55G3X8Y1 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim55G3X8Y1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Trim55G3X8Y1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim55G3X8Y1 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.49■□□□□ 0.39
Trim55G3X8Y1 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.49■□□□□ 0.39
Trim55G3X8Y1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.49■□□□□ 0.39
Trim55G3X8Y1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim55G3X8Y1 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim55G3X8Y1 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim55G3X8Y1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim55G3X8Y1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim55G3X8Y1 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim55G3X8Y1 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim55G3X8Y1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim55G3X8Y1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim55G3X8Y1 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim55G3X8Y1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim55G3X8Y1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trim55G3X8Y1 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim55G3X8Y1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim55G3X8Y1 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim55G3X8Y1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim55G3X8Y1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim55G3X8Y1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trim55G3X8Y1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim55G3X8Y1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim55G3X8Y1 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim55G3X8Y1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim55G3X8Y1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Trim55G3X8Y1 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim55G3X8Y1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim55G3X8Y1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim55G3X8Y1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim55G3X8Y1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim55G3X8Y1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim55G3X8Y1 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim55G3X8Y1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Trim55G3X8Y1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.47■□□□□ 0.39
Trim55G3X8Y1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim55G3X8Y1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim55G3X8Y1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim55G3X8Y1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim55G3X8Y1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim55G3X8Y1 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim55G3X8Y1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim55G3X8Y1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim55G3X8Y1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim55G3X8Y1 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim55G3X8Y1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim55G3X8Y1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim55G3X8Y1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim55G3X8Y1 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim55G3X8Y1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim55G3X8Y1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim55G3X8Y1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim55G3X8Y1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.46■□□□□ 0.39
Trim55G3X8Y1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trim55G3X8Y1 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim55G3X8Y1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim55G3X8Y1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim55G3X8Y1 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.46■□□□□ 0.39
Trim55G3X8Y1 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Trim55G3X8Y1 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim55G3X8Y1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Trim55G3X8Y1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.45■□□□□ 0.38
Trim55G3X8Y1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim55G3X8Y1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim55G3X8Y1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trim55G3X8Y1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Trim55G3X8Y1 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim55G3X8Y1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim55G3X8Y1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim55G3X8Y1 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim55G3X8Y1 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim55G3X8Y1 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim55G3X8Y1 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim55G3X8Y1 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim55G3X8Y1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim55G3X8Y1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim55G3X8Y1 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim55G3X8Y1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim55G3X8Y1 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trim55G3X8Y1 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trim55G3X8Y1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim55G3X8Y1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim55G3X8Y1 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim55G3X8Y1 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trim55G3X8Y1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim55G3X8Y1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms