Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf6F6VAN0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Atf6F6VAN0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.41■□□□□ 0.38
Atf6F6VAN0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Atf6F6VAN0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.41■□□□□ 0.38
Atf6F6VAN0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.41■□□□□ 0.38
Atf6F6VAN0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf6F6VAN0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf6F6VAN0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf6F6VAN0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
Atf6F6VAN0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf6F6VAN0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf6F6VAN0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Atf6F6VAN0 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.4■□□□□ 0.38
Atf6F6VAN0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Atf6F6VAN0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atf6F6VAN0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atf6F6VAN0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Atf6F6VAN0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atf6F6VAN0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atf6F6VAN0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atf6F6VAN0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atf6F6VAN0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Atf6F6VAN0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atf6F6VAN0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atf6F6VAN0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Atf6F6VAN0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atf6F6VAN0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Atf6F6VAN0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atf6F6VAN0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Atf6F6VAN0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atf6F6VAN0 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.39■□□□□ 0.37
Atf6F6VAN0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Atf6F6VAN0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.39■□□□□ 0.37
Atf6F6VAN0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Atf6F6VAN0 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.39■□□□□ 0.37
Atf6F6VAN0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atf6F6VAN0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
Atf6F6VAN0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atf6F6VAN0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atf6F6VAN0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Atf6F6VAN0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Atf6F6VAN0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atf6F6VAN0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atf6F6VAN0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atf6F6VAN0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Atf6F6VAN0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Atf6F6VAN0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.39■□□□□ 0.37
Atf6F6VAN0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atf6F6VAN0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Atf6F6VAN0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atf6F6VAN0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atf6F6VAN0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atf6F6VAN0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atf6F6VAN0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atf6F6VAN0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.38■□□□□ 0.37
Atf6F6VAN0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.38■□□□□ 0.37
Atf6F6VAN0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atf6F6VAN0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.38■□□□□ 0.37
Atf6F6VAN0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.38■□□□□ 0.37
Atf6F6VAN0 Mir5122-201ENSMUST00000175004 89 ntBASIC17.38■□□□□ 0.37
Atf6F6VAN0 Gm3375-201ENSMUST00000203929 796 ntBASIC17.38■□□□□ 0.37
Atf6F6VAN0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.38■□□□□ 0.37
Atf6F6VAN0 Odf3b-204ENSMUST00000227834 930 ntBASIC17.38■□□□□ 0.37
Atf6F6VAN0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Atf6F6VAN0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Atf6F6VAN0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atf6F6VAN0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atf6F6VAN0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Atf6F6VAN0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atf6F6VAN0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Atf6F6VAN0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Atf6F6VAN0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Atf6F6VAN0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Atf6F6VAN0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Atf6F6VAN0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf6F6VAN0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Atf6F6VAN0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf6F6VAN0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Atf6F6VAN0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf6F6VAN0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf6F6VAN0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Atf6F6VAN0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6F6VAN0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Gm7791-201ENSMUST00000219066 539 ntBASIC17.36■□□□□ 0.37
Atf6F6VAN0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6F6VAN0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms