Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.89■□□□□ 0.94
Ccdc85cE9Q6B2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc85cE9Q6B2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc85cE9Q6B2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc85cE9Q6B2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Ccdc85cE9Q6B2 Mir6956-201ENSMUST00000183598 62 ntBASIC20.89■□□□□ 0.93
Ccdc85cE9Q6B2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc85cE9Q6B2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC20.89■□□□□ 0.93
Ccdc85cE9Q6B2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC20.89■□□□□ 0.93
Ccdc85cE9Q6B2 AC139382.1-201ENSMUST00000221402 498 ntBASIC20.89■□□□□ 0.93
Ccdc85cE9Q6B2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Ccdc85cE9Q6B2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc85cE9Q6B2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc85cE9Q6B2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc85cE9Q6B2 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ccdc85cE9Q6B2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc85cE9Q6B2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc85cE9Q6B2 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc85cE9Q6B2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc85cE9Q6B2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Ccdc85cE9Q6B2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
Ccdc85cE9Q6B2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc85cE9Q6B2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.88■□□□□ 0.93
Ccdc85cE9Q6B2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc85cE9Q6B2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc85cE9Q6B2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc85cE9Q6B2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ccdc85cE9Q6B2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc85cE9Q6B2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Ccdc85cE9Q6B2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc85cE9Q6B2 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc85cE9Q6B2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC20.87■□□□□ 0.93
Ccdc85cE9Q6B2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc85cE9Q6B2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc85cE9Q6B2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.87■□□□□ 0.93
Ccdc85cE9Q6B2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc85cE9Q6B2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc85cE9Q6B2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc85cE9Q6B2 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC20.87■□□□□ 0.93
Ccdc85cE9Q6B2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc85cE9Q6B2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc85cE9Q6B2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc85cE9Q6B2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc85cE9Q6B2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.87■□□□□ 0.93
Ccdc85cE9Q6B2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc85cE9Q6B2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc85cE9Q6B2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc85cE9Q6B2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc85cE9Q6B2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc85cE9Q6B2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.86■□□□□ 0.93
Ccdc85cE9Q6B2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.86■□□□□ 0.93
Ccdc85cE9Q6B2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ccdc85cE9Q6B2 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc85cE9Q6B2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC20.86■□□□□ 0.93
Ccdc85cE9Q6B2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC20.86■□□□□ 0.93
Ccdc85cE9Q6B2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc85cE9Q6B2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC20.86■□□□□ 0.93
Ccdc85cE9Q6B2 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC20.86■□□□□ 0.93
Ccdc85cE9Q6B2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc85cE9Q6B2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc85cE9Q6B2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc85cE9Q6B2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc85cE9Q6B2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc85cE9Q6B2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc85cE9Q6B2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20.86■□□□□ 0.93
Ccdc85cE9Q6B2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc85cE9Q6B2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Ccdc85cE9Q6B2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc85cE9Q6B2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc85cE9Q6B2 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.86■□□□□ 0.93
Ccdc85cE9Q6B2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.85■□□□□ 0.93
Ccdc85cE9Q6B2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc85cE9Q6B2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc85cE9Q6B2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
Ccdc85cE9Q6B2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc85cE9Q6B2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc85cE9Q6B2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc85cE9Q6B2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC20.85■□□□□ 0.93
Ccdc85cE9Q6B2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20.85■□□□□ 0.93
Ccdc85cE9Q6B2 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc85cE9Q6B2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc85cE9Q6B2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc85cE9Q6B2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc85cE9Q6B2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.85■□□□□ 0.93
Ccdc85cE9Q6B2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc85cE9Q6B2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc85cE9Q6B2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc85cE9Q6B2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
Ccdc85cE9Q6B2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc85cE9Q6B2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc85cE9Q6B2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.84■□□□□ 0.93
Ccdc85cE9Q6B2 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.84■□□□□ 0.93
Ccdc85cE9Q6B2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc85cE9Q6B2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC20.84■□□□□ 0.93
Ccdc85cE9Q6B2 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC20.84■□□□□ 0.93
Ccdc85cE9Q6B2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC20.84■□□□□ 0.93
Ccdc85cE9Q6B2 AC174742.1-201ENSMUST00000218272 304 ntBASIC20.84■□□□□ 0.93
Ccdc85cE9Q6B2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc85cE9Q6B2 Gm37500-201ENSMUST00000192059 1443 ntBASIC20.84■□□□□ 0.93
Ccdc85cE9Q6B2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms