Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-2D3Z4R4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-2D3Z4R4 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Nkx6-2D3Z4R4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nkx6-2D3Z4R4 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-2D3Z4R4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-2D3Z4R4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.86□□□□□ -0.19
Nkx6-2D3Z4R4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC13.86□□□□□ -0.19
Nkx6-2D3Z4R4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-2D3Z4R4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-2D3Z4R4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Nkx6-2D3Z4R4 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-2D3Z4R4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-2D3Z4R4 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-2D3Z4R4 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-2D3Z4R4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nkx6-2D3Z4R4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-2D3Z4R4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-2D3Z4R4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-2D3Z4R4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-2D3Z4R4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-2D3Z4R4 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-2D3Z4R4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx6-2D3Z4R4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 Gm42501-201ENSMUST00000200220 1026 ntBASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx6-2D3Z4R4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-2D3Z4R4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-2D3Z4R4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-2D3Z4R4 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-2D3Z4R4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Nkx6-2D3Z4R4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-2D3Z4R4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-2D3Z4R4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Nkx6-2D3Z4R4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-2D3Z4R4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-2D3Z4R4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-2D3Z4R4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC13.84□□□□□ -0.19
Nkx6-2D3Z4R4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
Nkx6-2D3Z4R4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-2D3Z4R4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-2D3Z4R4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-2D3Z4R4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-2D3Z4R4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-2D3Z4R4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-2D3Z4R4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-2D3Z4R4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-2D3Z4R4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-2D3Z4R4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-2D3Z4R4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms