Protein–RNA interactions for Protein: C0HKE4

Hist1h2ae, Histone H2A type 1-E, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aeC0HKE4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.56■□□□□ 0.08
Hist1h2aeC0HKE4 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.56■□□□□ 0.08
Hist1h2aeC0HKE4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.56■□□□□ 0.08
Hist1h2aeC0HKE4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.56■□□□□ 0.08
Hist1h2aeC0HKE4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.56■□□□□ 0.08
Hist1h2aeC0HKE4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h2aeC0HKE4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h2aeC0HKE4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h2aeC0HKE4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h2aeC0HKE4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Hist1h2aeC0HKE4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h2aeC0HKE4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h2aeC0HKE4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h2aeC0HKE4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h2aeC0HKE4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Hist1h2aeC0HKE4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.56■□□□□ 0.08
Hist1h2aeC0HKE4 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hist1h2aeC0HKE4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Hist1h2aeC0HKE4 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hist1h2aeC0HKE4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Hist1h2aeC0HKE4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hist1h2aeC0HKE4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Hist1h2aeC0HKE4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hist1h2aeC0HKE4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Hist1h2aeC0HKE4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hist1h2aeC0HKE4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.55■□□□□ 0.08
Hist1h2aeC0HKE4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Hist1h2aeC0HKE4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hist1h2aeC0HKE4 Gm37292-201ENSMUST00000192062 758 ntBASIC15.55■□□□□ 0.08
Hist1h2aeC0HKE4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Hist1h2aeC0HKE4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hist1h2aeC0HKE4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hist1h2aeC0HKE4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Hist1h2aeC0HKE4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Gm12527-201ENSMUST00000117967 564 ntBASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Gm15378-201ENSMUST00000121894 207 ntBASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hist1h2aeC0HKE4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hist1h2aeC0HKE4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hist1h2aeC0HKE4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hist1h2aeC0HKE4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hist1h2aeC0HKE4 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Hist1h2aeC0HKE4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hist1h2aeC0HKE4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.53■□□□□ 0.08
Hist1h2aeC0HKE4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Hist1h2aeC0HKE4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Hist1h2aeC0HKE4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hist1h2aeC0HKE4 Gm10517-202ENSMUST00000192970 758 ntBASIC15.53■□□□□ 0.08
Hist1h2aeC0HKE4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.53■□□□□ 0.08
Hist1h2aeC0HKE4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hist1h2aeC0HKE4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hist1h2aeC0HKE4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hist1h2aeC0HKE4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hist1h2aeC0HKE4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hist1h2aeC0HKE4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hist1h2aeC0HKE4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hist1h2aeC0HKE4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Hist1h2aeC0HKE4 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hist1h2aeC0HKE4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hist1h2aeC0HKE4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hist1h2aeC0HKE4 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hist1h2aeC0HKE4 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hist1h2aeC0HKE4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Hist1h2aeC0HKE4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hist1h2aeC0HKE4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hist1h2aeC0HKE4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Hist1h2aeC0HKE4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hist1h2aeC0HKE4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.52■□□□□ 0.08
Hist1h2aeC0HKE4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Hist1h2aeC0HKE4 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hist1h2aeC0HKE4 Gm43183-201ENSMUST00000200632 547 ntBASIC15.52■□□□□ 0.08
Hist1h2aeC0HKE4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hist1h2aeC0HKE4 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Hist1h2aeC0HKE4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Hist1h2aeC0HKE4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
Hist1h2aeC0HKE4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.52■□□□□ 0.07
Hist1h2aeC0HKE4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms