Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a5A6H584 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Col6a5A6H584 Tgds-204ENSMUST00000228543 1594 ntBASIC12.79□□□□□ -0.36
Col6a5A6H584 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a5A6H584 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.79□□□□□ -0.36
Col6a5A6H584 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a5A6H584 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a5A6H584 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a5A6H584 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a5A6H584 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a5A6H584 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a5A6H584 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a5A6H584 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a5A6H584 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Col6a5A6H584 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a5A6H584 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.79□□□□□ -0.36
Col6a5A6H584 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.79□□□□□ -0.36
Col6a5A6H584 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.79□□□□□ -0.36
Col6a5A6H584 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.79□□□□□ -0.36
Col6a5A6H584 Gm5312-201ENSMUST00000203728 547 ntBASIC12.79□□□□□ -0.36
Col6a5A6H584 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.79□□□□□ -0.36
Col6a5A6H584 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a5A6H584 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Col6a5A6H584 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a5A6H584 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a5A6H584 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a5A6H584 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a5A6H584 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a5A6H584 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a5A6H584 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a5A6H584 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a5A6H584 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Col6a5A6H584 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.78□□□□□ -0.36
Col6a5A6H584 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.78□□□□□ -0.36
Col6a5A6H584 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a5A6H584 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.78□□□□□ -0.36
Col6a5A6H584 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.78□□□□□ -0.36
Col6a5A6H584 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a5A6H584 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a5A6H584 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.78□□□□□ -0.36
Col6a5A6H584 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a5A6H584 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a5A6H584 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.78□□□□□ -0.36
Col6a5A6H584 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.78□□□□□ -0.36
Col6a5A6H584 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.78□□□□□ -0.36
Col6a5A6H584 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Col6a5A6H584 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a5A6H584 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a5A6H584 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a5A6H584 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col6a5A6H584 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Col6a5A6H584 Gm34220-201ENSMUST00000223001 2709 ntBASIC12.77□□□□□ -0.36
Col6a5A6H584 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.77□□□□□ -0.36
Col6a5A6H584 Gm15653-201ENSMUST00000119247 907 ntBASIC12.77□□□□□ -0.36
Col6a5A6H584 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.77□□□□□ -0.36
Col6a5A6H584 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a5A6H584 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.77□□□□□ -0.36
Col6a5A6H584 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a5A6H584 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a5A6H584 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a5A6H584 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col6a5A6H584 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.36
Col6a5A6H584 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a5A6H584 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a5A6H584 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.77□□□□□ -0.37
Col6a5A6H584 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.77□□□□□ -0.37
Col6a5A6H584 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Col6a5A6H584 Gm44430-201ENSMUST00000203376 995 ntBASIC12.77□□□□□ -0.37
Col6a5A6H584 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Col6a5A6H584 Gm9194-201ENSMUST00000220749 1447 ntBASIC12.77□□□□□ -0.37
Col6a5A6H584 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Col6a5A6H584 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a5A6H584 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a5A6H584 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a5A6H584 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.76□□□□□ -0.37
Col6a5A6H584 Gm29791-202ENSMUST00000207888 369 ntBASIC12.76□□□□□ -0.37
Col6a5A6H584 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a5A6H584 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a5A6H584 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.76□□□□□ -0.37
Col6a5A6H584 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a5A6H584 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a5A6H584 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a5A6H584 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC12.76□□□□□ -0.37
Col6a5A6H584 Gm13186-201ENSMUST00000118031 316 ntBASIC12.76□□□□□ -0.37
Col6a5A6H584 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a5A6H584 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a5A6H584 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a5A6H584 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Col6a5A6H584 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a5A6H584 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a5A6H584 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a5A6H584 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Col6a5A6H584 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.75□□□□□ -0.37
Col6a5A6H584 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.75□□□□□ -0.37
Col6a5A6H584 Gm12428-201ENSMUST00000119844 727 ntBASIC12.75□□□□□ -0.37
Col6a5A6H584 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a5A6H584 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a5A6H584 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.75□□□□□ -0.37
Col6a5A6H584 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a5A6H584 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms