Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a4A2AX52 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a4A2AX52 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a4A2AX52 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a4A2AX52 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.25□□□□□ -0.13
Col6a4A2AX52 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.25□□□□□ -0.13
Col6a4A2AX52 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a4A2AX52 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a4A2AX52 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a4A2AX52 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a4A2AX52 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.25□□□□□ -0.13
Col6a4A2AX52 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.25□□□□□ -0.13
Col6a4A2AX52 Gm5364-201ENSMUST00000216789 889 ntBASIC14.25□□□□□ -0.13
Col6a4A2AX52 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a4A2AX52 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a4A2AX52 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a4A2AX52 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a4A2AX52 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.25□□□□□ -0.13
Col6a4A2AX52 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Col6a4A2AX52 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a4A2AX52 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a4A2AX52 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Col6a4A2AX52 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.25□□□□□ -0.13
Col6a4A2AX52 Gm27867-201ENSMUST00000184778 125 ntBASIC14.25□□□□□ -0.13
Col6a4A2AX52 Gm43575-201ENSMUST00000196420 516 ntBASIC14.25□□□□□ -0.13
Col6a4A2AX52 Gm29791-202ENSMUST00000207888 369 ntBASIC14.25□□□□□ -0.13
Col6a4A2AX52 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.25□□□□□ -0.13
Col6a4A2AX52 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a4A2AX52 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.25□□□□□ -0.13
Col6a4A2AX52 Phf7-203ENSMUST00000226565 1971 ntBASIC14.25□□□□□ -0.13
Col6a4A2AX52 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a4A2AX52 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a4A2AX52 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a4A2AX52 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Col6a4A2AX52 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a4A2AX52 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.24□□□□□ -0.13
Col6a4A2AX52 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.24□□□□□ -0.13
Col6a4A2AX52 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a4A2AX52 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a4A2AX52 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a4A2AX52 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a4A2AX52 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.24□□□□□ -0.13
Col6a4A2AX52 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a4A2AX52 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a4A2AX52 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a4A2AX52 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a4A2AX52 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.24□□□□□ -0.13
Col6a4A2AX52 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Col6a4A2AX52 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a4A2AX52 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a4A2AX52 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a4A2AX52 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a4A2AX52 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.24□□□□□ -0.13
Col6a4A2AX52 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a4A2AX52 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.24□□□□□ -0.13
Col6a4A2AX52 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.24□□□□□ -0.13
Col6a4A2AX52 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a4A2AX52 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a4A2AX52 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Col6a4A2AX52 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Col6a4A2AX52 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.23□□□□□ -0.13
Col6a4A2AX52 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.23□□□□□ -0.13
Col6a4A2AX52 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a4A2AX52 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a4A2AX52 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a4A2AX52 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a4A2AX52 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a4A2AX52 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a4A2AX52 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a4A2AX52 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a4A2AX52 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a4A2AX52 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a4A2AX52 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a4A2AX52 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a4A2AX52 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a4A2AX52 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a4A2AX52 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a4A2AX52 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a4A2AX52 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.23□□□□□ -0.13
Col6a4A2AX52 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a4A2AX52 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Col6a4A2AX52 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a4A2AX52 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a4A2AX52 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Col6a4A2AX52 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a4A2AX52 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
Col6a4A2AX52 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a4A2AX52 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.22□□□□□ -0.13
Col6a4A2AX52 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a4A2AX52 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.22□□□□□ -0.13
Col6a4A2AX52 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a4A2AX52 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.22□□□□□ -0.13
Col6a4A2AX52 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.22□□□□□ -0.13
Col6a4A2AX52 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.22□□□□□ -0.13
Col6a4A2AX52 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Col6a4A2AX52 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a4A2AX52 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a4A2AX52 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.22□□□□□ -0.13
Col6a4A2AX52 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
Col6a4A2AX52 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms